Detailed information NTG0201340

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: BKM67_RS00780
• Genome accession: NZ_CP017667
• Coordinates: 124294..124728 (+)
• Length: 144 a.a.
• NCBI ID: WP_105178941.1
• Uniprot ID: -
• Organism: Streptococcus suis strain 1081
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 119294..129728

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BKM67_RS00745 (BKM67_00740)	-	120034..120408 (+)	375	WP_024385120.1	DUF1033 family protein	-
BKM67_RS00750 (BKM67_00745)	-	120436..121386 (-)	951	WP_105183744.1	S66 peptidase family protein	-
BKM67_RS00755 (BKM67_00750)	comYA	121472..122422 (+)	951	WP_024412239.1	competence type IV pilus ATPase ComGA	Machinery gene
BKM67_RS00760 (BKM67_00755)	comYB	122334..123371 (+)	1038	WP_238145568.1	competence type IV pilus assembly protein ComGB	Machinery gene
BKM67_RS00765 (BKM67_00760)	comYC	123373..123654 (+)	282	WP_024385124.1	competence type IV pilus major pilin ComGC	Machinery gene
BKM67_RS00770 (BKM67_00765)	comGD	123635..124042 (+)	408	WP_015646273.1	competence type IV pilus minor pilin ComGD	-
BKM67_RS00775 (BKM67_00770)	comYE	124014..124307 (+)	294	WP_105178942.1	competence type IV pilus minor pilin ComGE	Machinery gene
BKM67_RS00780 (BKM67_00775)	comGF/cglF	124294..124728 (+)	435	WP_105178941.1	competence type IV pilus minor pilin ComGF	Machinery gene
BKM67_RS00785 (BKM67_00780)	comGG	124706..125119 (+)	414	WP_105183746.1	competence type IV pilus minor pilin ComGG	-
BKM67_RS00790 (BKM67_00785)	comYH	125169..126122 (+)	954	WP_105183747.1	class I SAM-dependent methyltransferase	Machinery gene
BKM67_RS00795 (BKM67_00790)	-	126172..127359 (+)	1188	WP_105183748.1	acetate kinase	-
BKM67_RS00800 (BKM67_00795)	-	127673..128224 (+)	552	WP_074391332.1	folate family ECF transporter S component	-
BKM67_RS00805 (BKM67_00800)	-	128280..129536 (+)	1257	WP_105183749.1	folylpolyglutamate synthase/dihydrofolate synthase family protein	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 16392.67 Da
• Isoelectric Point: 6.9823

>NTDB_id=201340 BKM67_RS00780 WP_105178941.1 124294..124728(+) (comGF/cglF) [Streptococcus suis strain 1081]
MLKSKIPAFTLLECLVALVILSGSLLVFEGLSKLLVQEAHYQGQTVQKEWLVFSSQLRSEWDQADLVKVENGRVYVDKGG
QALAFGKSRSDDFRKTNDRGQGYQPMLYQVDSTAISQENQLVRIDFSFKNGEERTFIYAFKEKS

Nucleotide

• Length: 435 bp

>NTDB_id=201340 BKM67_RS00780 WP_105178941.1 124294..124728(+) (comGF/cglF) [Streptococcus suis strain 1081]
TTGTTAAAAAGTAAAATTCCTGCTTTTACTCTCTTGGAATGCTTGGTAGCCTTAGTCATTCTTTCAGGTAGTCTTCTGGT
CTTTGAAGGCTTGTCAAAACTGCTGGTCCAAGAAGCGCATTATCAAGGTCAGACCGTTCAAAAGGAATGGTTGGTCTTCT
CTAGTCAATTGCGGTCGGAGTGGGACCAGGCTGACTTGGTCAAGGTTGAAAATGGCAGGGTCTATGTTGATAAGGGTGGT
CAGGCTTTGGCCTTTGGTAAGTCACGGTCGGATGATTTTCGGAAAACAAATGACAGGGGACAGGGCTACCAGCCCATGCT
CTATCAGGTGGATAGCACAGCTATTTCCCAAGAAAACCAGCTGGTGCGCATCGACTTTAGCTTTAAAAATGGAGAGGAGC
GGACCTTTATCTATGCTTTTAAAGAAAAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (37-134)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae Rx1	54.61	97.917	0.535
comGF/cglF	Streptococcus pneumoniae D39	54.61	97.917	0.535
comGF/cglF	Streptococcus pneumoniae R6	54.61	97.917	0.535
comGF/cglF	Streptococcus pneumoniae TIGR4	54.61	97.917	0.535
comGF/cglF	Streptococcus mitis NCTC 12261	54.478	93.056	0.507
comYF	Streptococcus mutans UA140	48.611	100	0.486
comGF/cglF	Streptococcus mitis SK321	51.493	93.056	0.479
comYF	Streptococcus mutans UA159	47.917	100	0.479
comGF	Lactococcus lactis subsp. cremoris KW2	46.099	97.917	0.451