Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | BKM67_RS00790 | Genome accession | NZ_CP017667 |
| Coordinates | 125169..126122 (+) | Length | 317 a.a. |
| NCBI ID | WP_105183747.1 | Uniprot ID | A0AAD0KXB3 |
| Organism | Streptococcus suis strain 1081 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 120169..131122
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BKM67_RS00750 (BKM67_00745) | - | 120436..121386 (-) | 951 | WP_105183744.1 | S66 peptidase family protein | - |
| BKM67_RS00755 (BKM67_00750) | comYA | 121472..122422 (+) | 951 | WP_024412239.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| BKM67_RS00760 (BKM67_00755) | comYB | 122334..123371 (+) | 1038 | WP_238145568.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| BKM67_RS00765 (BKM67_00760) | comYC | 123373..123654 (+) | 282 | WP_024385124.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| BKM67_RS00770 (BKM67_00765) | comGD | 123635..124042 (+) | 408 | WP_015646273.1 | competence type IV pilus minor pilin ComGD | - |
| BKM67_RS00775 (BKM67_00770) | comYE | 124014..124307 (+) | 294 | WP_105178942.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| BKM67_RS00780 (BKM67_00775) | comGF/cglF | 124294..124728 (+) | 435 | WP_105178941.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| BKM67_RS00785 (BKM67_00780) | comGG | 124706..125119 (+) | 414 | WP_105183746.1 | competence type IV pilus minor pilin ComGG | - |
| BKM67_RS00790 (BKM67_00785) | comYH | 125169..126122 (+) | 954 | WP_105183747.1 | class I SAM-dependent methyltransferase | Machinery gene |
| BKM67_RS00795 (BKM67_00790) | - | 126172..127359 (+) | 1188 | WP_105183748.1 | acetate kinase | - |
| BKM67_RS00800 (BKM67_00795) | - | 127673..128224 (+) | 552 | WP_074391332.1 | folate family ECF transporter S component | - |
| BKM67_RS00805 (BKM67_00800) | - | 128280..129536 (+) | 1257 | WP_105183749.1 | folylpolyglutamate synthase/dihydrofolate synthase family protein | - |
| BKM67_RS00810 (BKM67_00805) | pepA | 129581..130645 (-) | 1065 | WP_162636981.1 | glutamyl aminopeptidase | - |
| BKM67_RS00815 (BKM67_00810) | - | 130789..131073 (+) | 285 | WP_105183751.1 | DUF4651 domain-containing protein | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35687.89 Da Isoelectric Point: 4.4571
>NTDB_id=201341 BKM67_RS00790 WP_105183747.1 125169..126122(+) (comYH) [Streptococcus suis strain 1081]
MNFEKIEQAYDLLLENVQTIQNQLGTNIYDAMIEQNAAYVAGQHETDLVVTNNKALKQLDLTKEEWRRAFQFLFIKANQT
EPMQYNHQFTPDSIGFILTFLLDQLVPQDSVTVLEIGSGTGNLAQTILNASQKKLDYLGIEIDDLLIDLSASMADVMQAE
ISFAQGDAVRPQILKESQVIIADLPIGFYPDDQIASRYQVASPNEHTYAHHLLMEQSLKYLEKDGFAILLAPNDLLTSPQ
SDLLKGWLQEQANIVAMIALPPNLFGKAAMAKSIFVLQKKAARPLAPFVYPLQSLQEPEAIQKFMLNFKNWKQENAI
MNFEKIEQAYDLLLENVQTIQNQLGTNIYDAMIEQNAAYVAGQHETDLVVTNNKALKQLDLTKEEWRRAFQFLFIKANQT
EPMQYNHQFTPDSIGFILTFLLDQLVPQDSVTVLEIGSGTGNLAQTILNASQKKLDYLGIEIDDLLIDLSASMADVMQAE
ISFAQGDAVRPQILKESQVIIADLPIGFYPDDQIASRYQVASPNEHTYAHHLLMEQSLKYLEKDGFAILLAPNDLLTSPQ
SDLLKGWLQEQANIVAMIALPPNLFGKAAMAKSIFVLQKKAARPLAPFVYPLQSLQEPEAIQKFMLNFKNWKQENAI
Nucleotide
Download Length: 954 bp
>NTDB_id=201341 BKM67_RS00790 WP_105183747.1 125169..126122(+) (comYH) [Streptococcus suis strain 1081]
ATGAATTTTGAAAAGATCGAACAGGCTTACGACCTGCTATTAGAAAACGTACAGACTATCCAAAACCAGCTTGGCACCAA
TATCTATGACGCCATGATTGAGCAAAATGCTGCTTATGTAGCTGGTCAGCATGAGACGGACCTTGTTGTTACTAATAACA
AGGCCTTGAAACAACTGGATTTAACAAAGGAAGAATGGCGCCGTGCCTTCCAATTTTTGTTTATAAAGGCCAATCAGACA
GAGCCCATGCAGTACAATCACCAGTTCACCCCTGACAGTATTGGATTTATTTTGACCTTCCTTTTGGACCAGTTGGTGCC
TCAAGACTCTGTGACTGTCTTAGAAATTGGTTCGGGGACTGGGAACTTGGCGCAAACTATTCTCAATGCCAGCCAAAAGA
AGCTAGACTATCTAGGAATTGAAATTGACGACTTGTTGATTGATTTGTCGGCCAGCATGGCAGACGTTATGCAGGCAGAG
ATTTCTTTTGCTCAGGGCGATGCGGTACGTCCGCAGATTTTGAAGGAAAGCCAAGTCATTATTGCGGACCTGCCGATTGG
TTTTTATCCAGATGACCAGATTGCCAGCCGTTATCAGGTTGCCAGCCCAAATGAACATACCTACGCCCATCATTTACTCA
TGGAACAATCCCTCAAATATCTGGAAAAGGATGGATTCGCTATTCTCTTGGCTCCAAATGATTTGTTGACTAGTCCGCAA
AGCGATTTACTGAAAGGCTGGTTACAGGAGCAAGCCAATATTGTTGCCATGATTGCCCTGCCACCAAATCTCTTTGGGAA
GGCTGCTATGGCCAAGTCTATTTTTGTCTTGCAAAAGAAAGCTGCAAGACCGTTGGCGCCGTTTGTTTATCCCTTACAAA
GTCTTCAAGAACCAGAAGCTATTCAGAAGTTCATGCTCAATTTCAAAAATTGGAAGCAAGAGAATGCAATTTAA
ATGAATTTTGAAAAGATCGAACAGGCTTACGACCTGCTATTAGAAAACGTACAGACTATCCAAAACCAGCTTGGCACCAA
TATCTATGACGCCATGATTGAGCAAAATGCTGCTTATGTAGCTGGTCAGCATGAGACGGACCTTGTTGTTACTAATAACA
AGGCCTTGAAACAACTGGATTTAACAAAGGAAGAATGGCGCCGTGCCTTCCAATTTTTGTTTATAAAGGCCAATCAGACA
GAGCCCATGCAGTACAATCACCAGTTCACCCCTGACAGTATTGGATTTATTTTGACCTTCCTTTTGGACCAGTTGGTGCC
TCAAGACTCTGTGACTGTCTTAGAAATTGGTTCGGGGACTGGGAACTTGGCGCAAACTATTCTCAATGCCAGCCAAAAGA
AGCTAGACTATCTAGGAATTGAAATTGACGACTTGTTGATTGATTTGTCGGCCAGCATGGCAGACGTTATGCAGGCAGAG
ATTTCTTTTGCTCAGGGCGATGCGGTACGTCCGCAGATTTTGAAGGAAAGCCAAGTCATTATTGCGGACCTGCCGATTGG
TTTTTATCCAGATGACCAGATTGCCAGCCGTTATCAGGTTGCCAGCCCAAATGAACATACCTACGCCCATCATTTACTCA
TGGAACAATCCCTCAAATATCTGGAAAAGGATGGATTCGCTATTCTCTTGGCTCCAAATGATTTGTTGACTAGTCCGCAA
AGCGATTTACTGAAAGGCTGGTTACAGGAGCAAGCCAATATTGTTGCCATGATTGCCCTGCCACCAAATCTCTTTGGGAA
GGCTGCTATGGCCAAGTCTATTTTTGTCTTGCAAAAGAAAGCTGCAAGACCGTTGGCGCCGTTTGTTTATCCCTTACAAA
GTCTTCAAGAACCAGAAGCTATTCAGAAGTTCATGCTCAATTTCAAAAATTGGAAGCAAGAGAATGCAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA140 |
61.392 |
99.685 |
0.612 |
| comYH | Streptococcus mutans UA159 |
61.076 |
99.685 |
0.609 |