Detailed information NTG0197422

Bioinformatically predicted

Overview

• Name: dprA/cilB/dalA
• Type: Machinery gene
• Locus tag: WH25_RS06880
• Genome accession: NZ_CP017295
• Coordinates: 1445966..1446808 (-)
• Length: 280 a.a.
• NCBI ID: WP_046165539.1
• Uniprot ID: -
• Organism: Streptococcus gordonii strain IE35
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1440966..1451808

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WH25_RS06860 (WH25_06860)	-	1441791..1442285 (-)	495	WP_046165543.1	phosphoribosylanthranilate isomerase	-
WH25_RS06865 (WH25_06865)	-	1442305..1443012 (-)	708	WP_046165542.1	DUF3307 domain-containing protein	-
WH25_RS06870 (WH25_06870)	-	1442996..1443679 (-)	684	WP_046165541.1	SatD family protein	-
WH25_RS06875 (WH25_06875)	topA	1443789..1445882 (-)	2094	WP_155465122.1	type I DNA topoisomerase	-
WH25_RS06880 (WH25_06880)	dprA/cilB/dalA	1445966..1446808 (-)	843	WP_046165539.1	DNA-processing protein DprA	Machinery gene
WH25_RS06885 (WH25_06885)	-	1446936..1447514 (-)	579	WP_046165538.1	sugar O-acetyltransferase	-
WH25_RS06890 (WH25_06890)	-	1447511..1448329 (-)	819	WP_046165537.1	PRD domain-containing protein	-
WH25_RS06895 (WH25_06895)	-	1448347..1449111 (-)	765	WP_046165536.1	ribonuclease HII	-
WH25_RS06900 (WH25_06900)	ylqF	1449098..1449949 (-)	852	WP_046165535.1	ribosome biogenesis GTPase YlqF	-
WH25_RS06905 (WH25_06905)	-	1450094..1450432 (-)	339	WP_008808609.1	ATP cone domain-containing protein	-
WH25_RS06910 (WH25_06910)	dapA	1450673..1451608 (-)	936	WP_046165534.1	4-hydroxy-tetrahydrodipicolinate synthase	-

Sequence

Protein

• Length: 280 a.a.
• Molecular weight: 31200.82 Da
• Isoelectric Point: 6.2437

>NTDB_id=197422 WH25_RS06880 WP_046165539.1 1445966..1446808(-) (dprA/cilB/dalA) [Streptococcus gordonii strain IE35]
MKNYDIYKLKHAGLTNGQVLNVLRYAENKEKELSLRDIAVVSECRNPALFMERYKQIDDDFLKKSFEEFPSFSILDDIYP
WDLSEIYNPPALLFYQGNIDLLELPKVAVVGSRDSSKLGNQSVQRIIKELNNELIIVSGLARGIDTAAHMAALQNGGRTI
AVIGTGLDVFYPKANKKLQSYIGKNHLVLSEYGPGEQPLKFHFPERNRIIAGLCRGVIVAEAKMRSGSLITCERAMEEGR
DVFAIPGSILDGKSDGCHHLIQEGAKCIMSGSDVLSEFDF

Nucleotide

• Length: 843 bp

>NTDB_id=197422 WH25_RS06880 WP_046165539.1 1445966..1446808(-) (dprA/cilB/dalA) [Streptococcus gordonii strain IE35]
ATGAAAAACTATGATATTTATAAATTGAAACATGCTGGACTGACTAATGGACAAGTTCTTAATGTCTTGAGATATGCTGA
AAACAAGGAAAAGGAGCTTTCTTTGCGTGATATAGCGGTGGTATCAGAATGTCGTAATCCTGCTCTGTTTATGGAACGCT
ATAAGCAAATTGATGACGATTTTTTAAAGAAATCCTTTGAGGAATTTCCCTCTTTTTCTATCTTGGATGATATTTATCCA
TGGGATTTGAGTGAGATATATAACCCACCTGCTCTTTTGTTTTATCAGGGAAATATTGATCTGCTTGAATTGCCAAAAGT
AGCAGTAGTCGGAAGTCGTGATAGTAGCAAGCTTGGTAATCAGTCCGTTCAGAGAATTATTAAAGAATTGAATAATGAAT
TAATCATTGTGAGTGGGTTAGCGCGTGGGATTGACACAGCTGCTCATATGGCAGCCTTACAGAATGGCGGTCGAACTATA
GCTGTTATTGGGACTGGATTAGATGTTTTTTATCCTAAAGCCAATAAGAAACTTCAGTCCTATATTGGCAAAAATCACCT
GGTTTTATCAGAATACGGTCCTGGTGAACAACCCTTGAAGTTTCATTTTCCTGAACGTAATCGAATTATCGCAGGTTTGT
GCAGAGGCGTCATTGTTGCTGAAGCTAAGATGAGATCTGGAAGCTTGATAACTTGTGAGCGAGCGATGGAAGAAGGAAGA
GATGTATTTGCTATACCTGGATCAATTCTAGATGGAAAATCTGATGGCTGCCATCATTTGATTCAAGAAGGCGCTAAGTG
CATTATGTCGGGCTCTGATGTCCTGTCTGAGTTTGATTTTTAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (74-269)

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (1-60)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	78.929	100	0.789
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	78.571	100	0.786
dprA/cilB/dalA	Streptococcus pneumoniae D39	78.571	100	0.786
dprA/cilB/dalA	Streptococcus pneumoniae R6	78.571	100	0.786
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	78.571	100	0.786
dprA/cilB/dalA	Streptococcus mitis SK321	78.214	100	0.782
dprA	Streptococcus mutans UA159	66.071	100	0.661
dprA	Lactococcus lactis subsp. cremoris KW2	57.554	99.286	0.571
dprA	Legionella pneumophila strain ERS1305867	43.096	85.357	0.368