Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | BH714_RS19145 | Genome accession | NZ_CP017279 |
| Coordinates | 4078907..4079434 (+) | Length | 175 a.a. |
| NCBI ID | WP_020882840.1 | Uniprot ID | A0A839BRA2 |
| Organism | Enterobacter ludwigii strain EN-119 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 4073907..4084434
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BH714_RS19125 (BH714_19125) | aphA | 4074230..4074943 (+) | 714 | WP_014168217.1 | acid phosphatase AphA | - |
| BH714_RS19130 (BH714_19130) | - | 4075057..4075473 (+) | 417 | WP_014168218.1 | secondary thiamine-phosphate synthase enzyme YjbQ | - |
| BH714_RS19135 (BH714_19135) | - | 4075476..4075829 (+) | 354 | WP_014168219.1 | MmcQ/YjbR family DNA-binding protein | - |
| BH714_RS19140 (BH714_19140) | uvrA | 4075833..4078655 (-) | 2823 | WP_014168220.1 | excinuclease ABC subunit UvrA | - |
| BH714_RS19145 (BH714_19145) | ssb | 4078907..4079434 (+) | 528 | WP_020882840.1 | single-stranded DNA-binding protein SSB1 | Machinery gene |
| BH714_RS19150 (BH714_19150) | - | 4079498..4079779 (-) | 282 | WP_020882839.1 | YjcB family protein | - |
| BH714_RS19155 (BH714_19155) | - | 4080269..4081669 (+) | 1401 | WP_040018685.1 | sensor domain-containing diguanylate cyclase | - |
| BH714_RS19160 (BH714_19160) | - | 4082009..4083574 (+) | 1566 | WP_040018686.1 | EAL domain-containing protein | - |
| BH714_RS19165 (BH714_19165) | soxS | 4083581..4083907 (-) | 327 | WP_013095071.1 | superoxide response transcriptional regulator SoxS | - |
Sequence
Protein
Download Length: 175 a.a. Molecular weight: 18705.74 Da Isoelectric Point: 5.2456
>NTDB_id=197294 BH714_RS19145 WP_020882840.1 4078907..4079434(+) (ssb) [Enterobacter ludwigii strain EN-119]
MASRGVNKVILVGNLGQDPEVRYMPSGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAEVAGEYLRKGSQVYI
EGQLRTRKWTDQAGAEKYTTEVVVNVGGTMQMLGGRQGGGAPAGGGQQQQGGWGQPQQPQGGNQFSGGAQSRPQQQSAPA
PSNEPPMDFDDDIPF
MASRGVNKVILVGNLGQDPEVRYMPSGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAEVAGEYLRKGSQVYI
EGQLRTRKWTDQAGAEKYTTEVVVNVGGTMQMLGGRQGGGAPAGGGQQQQGGWGQPQQPQGGNQFSGGAQSRPQQQSAPA
PSNEPPMDFDDDIPF
Nucleotide
Download Length: 528 bp
>NTDB_id=197294 BH714_RS19145 WP_020882840.1 4078907..4079434(+) (ssb) [Enterobacter ludwigii strain EN-119]
ATGGCCAGCAGAGGCGTAAACAAGGTGATTCTCGTCGGTAATCTGGGCCAGGACCCGGAAGTACGCTACATGCCGAGTGG
TGGCGCAGTTGCCAACATTACGCTGGCTACTTCCGAATCCTGGCGTGATAAAGCGACCGGTGAGATGAAAGAGCAGACCG
AATGGCACCGCGTAGTGCTGTTTGGCAAACTGGCGGAAGTGGCTGGTGAGTATCTGCGTAAAGGTTCTCAGGTTTATATT
GAAGGCCAGCTGCGTACCCGCAAATGGACCGATCAAGCCGGCGCTGAGAAGTACACCACGGAAGTTGTGGTCAACGTGGG
TGGCACCATGCAGATGCTCGGTGGCCGTCAGGGCGGTGGCGCACCAGCAGGTGGCGGTCAGCAGCAGCAGGGCGGTTGGG
GTCAGCCTCAGCAGCCACAGGGCGGCAACCAGTTCAGCGGTGGCGCGCAGTCTCGCCCACAGCAGCAGTCCGCGCCAGCA
CCGTCTAACGAACCCCCAATGGACTTCGACGACGATATTCCGTTCTGA
ATGGCCAGCAGAGGCGTAAACAAGGTGATTCTCGTCGGTAATCTGGGCCAGGACCCGGAAGTACGCTACATGCCGAGTGG
TGGCGCAGTTGCCAACATTACGCTGGCTACTTCCGAATCCTGGCGTGATAAAGCGACCGGTGAGATGAAAGAGCAGACCG
AATGGCACCGCGTAGTGCTGTTTGGCAAACTGGCGGAAGTGGCTGGTGAGTATCTGCGTAAAGGTTCTCAGGTTTATATT
GAAGGCCAGCTGCGTACCCGCAAATGGACCGATCAAGCCGGCGCTGAGAAGTACACCACGGAAGTTGTGGTCAACGTGGG
TGGCACCATGCAGATGCTCGGTGGCCGTCAGGGCGGTGGCGCACCAGCAGGTGGCGGTCAGCAGCAGCAGGGCGGTTGGG
GTCAGCCTCAGCAGCCACAGGGCGGCAACCAGTTCAGCGGTGGCGCGCAGTCTCGCCCACAGCAGCAGTCCGCGCCAGCA
CCGTCTAACGAACCCCCAATGGACTTCGACGACGATATTCCGTTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
75.556 |
100 |
0.777 |
| ssb | Glaesserella parasuis strain SC1401 |
56.522 |
100 |
0.594 |
| ssb | Neisseria meningitidis MC58 |
46.629 |
100 |
0.474 |
| ssb | Neisseria gonorrhoeae MS11 |
46.629 |
100 |
0.474 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
35.556 |
100 |
0.366 |