Detailed information NTG0193308

Bioinformatically predicted

Overview

• Name: comA
• Type: Regulator
• Locus tag: BEN15_RS04525
• Genome accession: NZ_CP016877
• Coordinates: 842759..843328 (+)
• Length: 189 a.a.
• NCBI ID: WP_065972905.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain KLDS 3.1003
• Function: processing and transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 837759..848328

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BEN15_RS04485 (BEN15_04485)	-	837904..838443 (+)	540	WP_418346454.1	tRNA (cytidine(34)-2'-O)-methyltransferase	-
BEN15_RS04490 (BEN15_04490)	-	838754..839311 (+)	558	WP_002949523.1	ECF transporter S component	-
BEN15_RS04495 (BEN15_04495)	-	839314..839964 (+)	651	WP_065972904.1	phosphatase PAP2 family protein	-
BEN15_RS04500 (BEN15_04500)	comR	840159..841058 (+)	900	WP_014607953.1	helix-turn-helix domain-containing protein	Regulator
BEN15_RS11580	-	841296..841727 (+)	432	Protein_812	cysteine peptidase family C39 domain-containing protein	-
BEN15_RS11585	-	841757..842473 (+)	717	Protein_813	ABC transporter transmembrane domain-containing protein	-
BEN15_RS04520 (BEN15_04520)	comA	842495..842704 (+)	210	WP_002946147.1	hypothetical protein	Regulator
BEN15_RS04525 (BEN15_04525)	comA	842759..843328 (+)	570	WP_065972905.1	ATP-binding cassette domain-containing protein	Regulator
BEN15_RS11590	-	843559..843747 (+)	189	WP_224103239.1	DUF805 domain-containing protein	-
BEN15_RS12130	-	843715..843999 (-)	285	WP_014727318.1	hypothetical protein	-
BEN15_RS11600 (BEN15_04535)	-	844239..845132 (-)	894	WP_014727319.1	hypothetical protein	-
BEN15_RS04540 (BEN15_04540)	-	845540..846055 (+)	516	WP_002949547.1	AmiS/UreI family transporter	-
BEN15_RS04545 (BEN15_04545)	-	846080..846382 (+)	303	WP_002886558.1	urease subunit gamma	-
BEN15_RS04550 (BEN15_04550)	-	846394..846705 (+)	312	WP_002886559.1	urease subunit beta	-

Sequence

Protein

• Length: 189 a.a.
• Molecular weight: 20681.65 Da
• Isoelectric Point: 6.8724

>NTDB_id=193308 BEN15_RS04525 WP_065972905.1 842759..843328(+) (comA) [Streptococcus thermophilus strain KLDS 3.1003]
MGQSSSGKTTLAKISSGYYTKSSGHVSLDKASISQAELRQLVTYVPQQTYVFMGTILENLLLGLEGEVDEHLILKVCEQA
DILADIQKMPLGFQTQVSEDGGLSGGQKQRLAIARALLSNQPILIFDEATSGLDRETESRVMANLSKLTRTMIFIAHRSS
VYQHVSRVVTMANGKLEAASPNFNPFQFI

Nucleotide

• Length: 570 bp

>NTDB_id=193308 BEN15_RS04525 WP_065972905.1 842759..843328(+) (comA) [Streptococcus thermophilus strain KLDS 3.1003]
ATGGGTCAGAGTAGTTCTGGGAAAACGACTTTAGCGAAGATTTCGTCAGGTTATTACACAAAATCTAGTGGTCATGTAAG
CCTAGACAAAGCTTCTATTAGCCAAGCGGAGTTGCGCCAGTTGGTGACCTATGTTCCACAACAGACCTATGTCTTTATGG
GAACAATATTAGAAAATTTATTGTTAGGCCTTGAAGGAGAAGTTGATGAGCATCTTATTCTGAAAGTCTGTGAACAAGCC
GATATTTTGGCTGATATTCAAAAGATGCCCCTAGGTTTTCAGACCCAAGTATCTGAAGATGGAGGTCTGTCTGGCGGTCA
AAAACAAAGATTAGCTATAGCAAGGGCTCTCTTGTCCAATCAACCAATCTTGATTTTTGATGAAGCTACAAGTGGTCTGG
ACAGGGAAACTGAAAGTAGAGTAATGGCCAATCTTTCTAAACTGACACGAACAATGATTTTCATTGCTCACCGTAGCAGT
GTCTACCAACATGTCAGTCGTGTAGTGACTATGGCAAATGGGAAGCTTGAAGCAGCTAGTCCCAACTTCAATCCATTCCA
GTTCATTTAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (1-131)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Streptococcus mitis SK321	50.556	95.238	0.481
comA	Streptococcus pneumoniae Rx1	50	95.238	0.476
comA	Streptococcus pneumoniae D39	50	95.238	0.476
comA	Streptococcus pneumoniae R6	50	95.238	0.476
comA	Streptococcus mitis NCTC 12261	49.444	95.238	0.471
comA	Streptococcus pneumoniae TIGR4	49.444	95.238	0.471
comA	Streptococcus gordonii str. Challis substr. CH1	48.889	95.238	0.466
comA/nlmT	Streptococcus mutans UA159	46.667	95.238	0.444