Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilV   Type   Machinery gene
Locus tag   QP84_RS08565 Genome accession   NZ_CP016684
Coordinates   1663570..1664190 (+) Length   206 a.a.
NCBI ID   WP_042745216.1    Uniprot ID   -
Organism   Neisseria meningitidis strain L91543     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1658570..1669190
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QP84_RS08540 (QP84_008540) - 1658665..1658997 (+) 333 WP_002213854.1 hypothetical protein -
  QP84_RS08545 (QP84_008545) - 1659328..1659837 (+) 510 WP_002213852.1 isoprenylcysteine carboxyl methyltransferase family protein -
  QP84_RS08550 (QP84_008550) - 1660407..1660994 (-) 588 WP_002220670.1 superoxide dismutase -
  QP84_RS08555 (QP84_008555) dnaB 1661157..1662563 (+) 1407 WP_002220671.1 replicative DNA helicase -
  QP84_RS08560 (QP84_008560) pilH 1662872..1663540 (+) 669 WP_065818665.1 GspH/FimT family pseudopilin Machinery gene
  QP84_RS08565 (QP84_008565) pilV 1663570..1664190 (+) 621 WP_042745216.1 type IV pilus modification protein PilV Machinery gene
  QP84_RS08570 (QP84_008570) pilJ 1664187..1665173 (+) 987 WP_025458522.1 PilW family protein Machinery gene
  QP84_RS08575 (QP84_008575) pilK 1665152..1665745 (+) 594 WP_002219444.1 pilus assembly PilX family protein Machinery gene
  QP84_RS08580 (QP84_008580) pilX 1665750..1666223 (+) 474 WP_180302171.1 PilX family type IV pilin Machinery gene
  QP84_RS08585 (QP84_008585) - 1668310..1668738 (-) 429 Protein_1590 AzlC family ABC transporter permease -

Sequence

Protein


Download         Length: 206 a.a.        Molecular weight: 22373.39 Da        Isoelectric Point: 5.6863

>NTDB_id=191829 QP84_RS08565 WP_042745216.1 1663570..1664190(+) (pilV) [Neisseria meningitidis strain L91543]
MKNNDCFRLKNPQSGMALIEVLVAMLVLTIGILALLSVQLRTVASVREAETQTIVSQITQNLMEGMLMNPTIDSDSNKKN
YNLYMGNHTLPHTLSAVDGDFQVGVIKTKTQLAEAQLKRFSYELKNALPDAAAIHYAVCKDSSGNAPTLSGNAFSSNCDN
KANGDTLIKVLWVNDSAGDSDISRTNLEVSGDNIVYTYQARVGGRE

Nucleotide


Download         Length: 621 bp        

>NTDB_id=191829 QP84_RS08565 WP_042745216.1 1663570..1664190(+) (pilV) [Neisseria meningitidis strain L91543]
ATGAAGAATAATGATTGCTTCCGCCTGAAAAACCCCCAGTCCGGTATGGCGCTGATAGAAGTCTTGGTCGCTATGCTCGT
TCTGACCATCGGTATTTTGGCACTATTGTCTGTTCAGTTGCGGACAGTCGCTTCCGTCAGGGAGGCAGAGACGCAAACCA
TCGTCAGCCAAATCACGCAAAACCTGATGGAAGGAATGTTGATGAATCCGACCATTGATTCGGACAGCAACAAGAAAAAC
TATAATCTTTACATGGGAAACCATACACTACCGCATACACTATCAGCTGTGGATGGCGATTTTCAGGTTGGTGTCATAAA
AACTAAGACGCAGTTGGCAGAGGCACAATTGAAGAGATTTAGTTATGAGCTGAAAAATGCCTTGCCGGATGCGGCAGCCA
TCCATTACGCCGTCTGCAAGGATTCGTCGGGTAACGCGCCGACATTGTCCGGCAATGCTTTTTCTTCAAATTGCGACAAT
AAGGCAAACGGGGATACTTTAATTAAAGTATTGTGGGTAAATGATTCGGCAGGGGATTCGGATATTTCCCGTACGAATCT
TGAGGTGAGCGGCGACAATATCGTATATACTTATCAGGCAAGGGTCGGAGGTCGGGAATGA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(11-36)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilV Neisseria meningitidis 8013

96.602

100

0.966
  pilI Neisseria gonorrhoeae MS11

84.466

100

0.845
  pilV Neisseria gonorrhoeae MS11

84.466

100

0.845

Multiple sequence alignment