Detailed information    

insolico Bioinformatically predicted

Overview

Name   crp   Type   Regulator
Locus tag   B7L39_RS02550 Genome accession   NZ_CP020592
Coordinates   505826..506491 (+) Length   221 a.a.
NCBI ID   WP_000203219.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain USA2     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 500826..511491
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B7L39_RS02535 (B7L39_02535) - 503137..503667 (+) 531 WP_001010300.1 hypothetical protein -
  B7L39_RS02545 (B7L39_02545) - 504965..505387 (-) 423 WP_001195082.1 OsmC family protein -
  B7L39_RS19480 - 505466..505585 (-) 120 Protein_501 hypothetical protein -
  B7L39_RS02550 (B7L39_02550) crp 505826..506491 (+) 666 WP_000203219.1 cAMP-activated global transcriptional regulator CRP Regulator
  B7L39_RS02555 (B7L39_02555) - 506548..507638 (+) 1091 WP_085940413.1 IS4-like element ISAba1 family transposase -
  B7L39_RS02560 (B7L39_02560) - 508048..508365 (+) 318 WP_001038421.1 hypothetical protein -
  B7L39_RS02565 (B7L39_02565) mumR 508649..509560 (+) 912 WP_001049897.1 LysR family transcriptional regulator MumR -
  B7L39_RS02570 (B7L39_02570) - 509905..511158 (+) 1254 WP_001989322.1 NRAMP family divalent metal transporter -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 24956.78 Da        Isoelectric Point: 8.1128

>NTDB_id=188318 B7L39_RS02550 WP_000203219.1 505826..506491(+) (crp) [Acinetobacter baumannii strain USA2]
MTSNFSQLSTDALSPGQLPESVKALLKRAHINRYPKRTTIVDAGTESKSLYLILKGSVSIILREDDEREIVVAYLNPGDF
FGEMGLFEPNPQRTAEVRTRDVCEIAEISYDNFHELSKQYPDLSYAVFAQLVRRLKNTTRKMTDLAFIDVSGRIARCLID
LSSQPEAMILPNGRQIRITRQEIGRIVGCSREMVGRVLKTLEDQGMIQTDGKAILIFLCTR

Nucleotide


Download         Length: 666 bp        

>NTDB_id=188318 B7L39_RS02550 WP_000203219.1 505826..506491(+) (crp) [Acinetobacter baumannii strain USA2]
ATGACTTCAAATTTTTCACAACTCAGCACAGATGCTTTATCTCCGGGGCAACTACCTGAATCCGTTAAAGCATTGTTAAA
ACGTGCTCACATCAACAGATATCCAAAACGAACCACAATTGTTGATGCCGGAACAGAGTCAAAATCTTTATATTTAATTT
TAAAAGGCTCAGTTTCAATTATTTTACGTGAAGACGATGAACGTGAAATTGTTGTGGCATATTTGAATCCTGGTGACTTC
TTTGGGGAAATGGGGCTTTTCGAACCGAACCCTCAACGTACAGCTGAAGTTCGTACCCGTGATGTCTGTGAAATTGCGGA
AATTTCATATGACAACTTCCACGAACTGAGCAAACAGTATCCAGATCTCAGCTATGCCGTTTTCGCGCAACTCGTTCGTC
GTTTAAAAAATACAACTCGTAAAATGACCGATCTTGCATTTATTGATGTGTCAGGCCGTATTGCGCGTTGCTTAATCGAC
CTATCTTCACAACCAGAAGCAATGATCTTGCCGAATGGCCGTCAAATTCGTATTACTCGACAAGAGATTGGACGCATTGT
CGGGTGTTCACGAGAAATGGTTGGCCGTGTATTAAAGACCTTAGAAGATCAAGGTATGATTCAAACTGACGGTAAAGCTA
TTCTAATTTTTCTCTGTACACGATAA

Domains

Predicted by InterProScan.

Bacterial regulatory proteins, crp family (Crp)

(176-207)

Cyclic nucleotide-binding domain (cNMP_binding)

(33-120)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  crp Acinetobacter baumannii D1279779

100

98.19

0.982
  crp Vibrio cholerae strain A1552

47.317

92.76

0.439
  crp Haemophilus influenzae Rd KW20

48.705

87.33

0.425

Multiple sequence alignment