Detailed information    

insolico Bioinformatically predicted

Overview

Name   comM   Type   Machinery gene
Locus tag   AT729_RS02355 Genome accession   NZ_CP015886
Coordinates   394616..396112 (+) Length   498 a.a.
NCBI ID   WP_079889363.1    Uniprot ID   -
Organism   Neisseria meningitidis strain 38277     
Function   ssDNA binding (predicted from homology)   
DNA processing

Genomic Context

Location: 389616..401112
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AT729_RS02340 (AT729_00391) putP 392273..393799 (-) 1527 WP_002220352.1 sodium/proline symporter PutP -
  AT729_RS02350 (AT729_00392) - 394282..394602 (+) 321 WP_002216505.1 accessory factor UbiK family protein -
  AT729_RS02355 (AT729_00393) comM 394616..396112 (+) 1497 WP_079889363.1 YifB family Mg chelatase-like AAA ATPase Machinery gene
  AT729_RS02360 (AT729_00394) ftsN 396218..397063 (+) 846 WP_002241111.1 cell division protein FtsN -
  AT729_RS02365 (AT729_00395) dsbA1 397066..397710 (+) 645 WP_079889364.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  AT729_RS02370 (AT729_00396) - 397743..398564 (+) 822 WP_002222025.1 undecaprenyl-diphosphate phosphatase -
  AT729_RS02390 (AT729_00399) - 399137..400354 (-) 1218 WP_014575169.1 class I SAM-dependent methyltransferase -
  AT729_RS02395 (AT729_00400) mraZ 400633..401088 (+) 456 WP_002218779.1 division/cell wall cluster transcriptional repressor MraZ -

Sequence

Protein


Download         Length: 498 a.a.        Molecular weight: 53457.44 Da        Isoelectric Point: 6.8995

>NTDB_id=182776 AT729_RS02355 WP_079889363.1 394616..396112(+) (comM) [Neisseria meningitidis strain 38277]
MSLALVYSRALSGMNAPLVEVEAHLANGLPHFNIVGLPDTEVKESRDRVRAAIIQSGFEFPAKKITVNLAPADLPKESGR
FDLPIAIGILAASGQVAPEKLAEYEFAGELALSGLLRPVRGALAMAWQGMQAKRAFVLPEENAGQAAVMRGITVYGARSL
GEVAAHLNGIEPLAQTECSVPQMPSEHGGQPDLCDVKGQHTARLALEIAAAGGHSLLMMGPPGTGKSMLSQRLPGILPPL
TEDELVEVWALRSLLPNHQQQLDSNRPFRSPHHSASAAAMVGGGSDPRPGEISLAHHGVLFLDELPEFDRKVLEVLREPL
ENGEIHISRAARQAVYPAKFQLVAAMNPCPCGYLGHPVKPCRCTPESVARYRSKISGPLLDRIDLTIEVPSLSAAELMQQ
EAGESSASVLERVIAARDKQYARQGKVNAALSVSELDTSARIQKEAQEALGSLLEKLSLSARSFHRIMRVARTLADLAGD
EEVGRSHVMKAIGFRRAL

Nucleotide


Download         Length: 1497 bp        

>NTDB_id=182776 AT729_RS02355 WP_079889363.1 394616..396112(+) (comM) [Neisseria meningitidis strain 38277]
ATGTCGCTTGCCTTGGTTTACAGCCGCGCCTTGAGCGGTATGAATGCGCCGTTGGTCGAAGTGGAAGCCCACCTTGCCAA
CGGCCTGCCACATTTCAACATCGTCGGGCTGCCCGATACGGAAGTAAAGGAAAGCCGCGACCGCGTCCGTGCCGCCATTA
TTCAAAGCGGTTTTGAATTCCCCGCCAAAAAAATTACCGTCAACCTCGCCCCCGCCGACCTGCCCAAAGAGTCGGGGCGT
TTCGATTTGCCGATTGCAATCGGCATCCTTGCTGCATCGGGGCAGGTTGCGCCCGAAAAACTGGCGGAATACGAGTTTGC
GGGGGAATTGGCACTGTCGGGGCTGTTGCGCCCCGTGCGCGGCGCGTTGGCGATGGCGTGGCAGGGTATGCAGGCAAAAC
GTGCATTTGTTTTGCCTGAAGAAAACGCAGGACAAGCCGCCGTGATGCGCGGCATTACCGTTTACGGCGCGCGCTCTTTG
GGCGAAGTCGCCGCCCATTTGAACGGTATCGAACCTTTGGCGCAAACCGAATGTTCCGTACCGCAAATGCCGTCTGAACA
TGGCGGACAACCTGATTTGTGCGATGTGAAAGGTCAGCACACCGCGCGCCTTGCTTTGGAAATCGCTGCCGCAGGCGGAC
ACAGCCTCTTGATGATGGGTCCACCGGGAACAGGCAAGTCTATGCTCTCCCAACGGCTGCCAGGCATCCTGCCGCCGCTG
ACCGAAGACGAATTGGTAGAAGTTTGGGCATTGCGTTCGCTCCTGCCCAACCACCAACAACAACTCGACAGCAACCGTCC
TTTCCGCAGTCCGCATCACAGTGCCAGTGCGGCGGCTATGGTCGGCGGCGGTTCCGACCCGCGTCCGGGCGAGATTTCAT
TGGCGCACCACGGCGTATTGTTTTTGGACGAGCTGCCCGAGTTCGACCGCAAAGTTTTGGAAGTTTTGCGCGAACCGTTG
GAAAACGGCGAAATCCACATTTCCCGCGCGGCGCGCCAAGCCGTCTATCCTGCCAAATTCCAACTTGTCGCCGCCATGAA
CCCGTGTCCGTGCGGTTATCTCGGGCATCCCGTCAAACCCTGCCGCTGCACGCCCGAAAGCGTCGCGCGTTACCGCAGCA
AGATTTCCGGCCCGCTGCTCGACCGCATCGATTTGACCATCGAAGTCCCCAGCCTGTCCGCCGCCGAACTGATGCAGCAG
GAAGCGGGCGAAAGCAGCGCGTCCGTTTTGGAACGCGTTATCGCCGCTAGAGACAAACAATACGCACGGCAAGGCAAAGT
GAATGCCGCCTTGAGTGTCAGTGAACTCGACACATCCGCCCGCATCCAAAAAGAAGCGCAGGAAGCATTGGGCAGCCTGC
TGGAAAAACTCTCCCTTTCCGCCCGCAGCTTCCACCGCATTATGCGCGTGGCGCGTACATTGGCGGATTTGGCAGGCGAC
GAAGAAGTCGGCAGAAGCCACGTCATGAAAGCCATAGGTTTCCGCCGTGCTTTATAG

Domains

Predicted by InterproScan.

Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C)

(403-495)

Magnesium chelatase, subunit ChlI (Mg_chelatase)

(192-396)

Subunit ChlI of Mg-chelatase (ChlI)

(21-142)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comM Vibrio cholerae strain A1552

53.386

100

0.538
  comM Vibrio campbellii strain DS40M4

52.314

99.799

0.522
  comM Haemophilus influenzae Rd KW20

49.699

100

0.498
  comM Glaesserella parasuis strain SC1401

48.81

100

0.494
  comM Legionella pneumophila str. Paris

46.733

100

0.474
  comM Legionella pneumophila strain ERS1305867

46.733

100

0.474
  RA0C_RS07335 Riemerella anatipestifer ATCC 11845 = DSM 15868

42.942

100

0.434

Multiple sequence alignment