Detailed information    

insolico Bioinformatically predicted

Overview

Name   dsbA1   Type   Machinery gene
Locus tag   AT729_RS02365 Genome accession   NZ_CP015886
Coordinates   397066..397710 (+) Length   214 a.a.
NCBI ID   WP_079889364.1    Uniprot ID   -
Organism   Neisseria meningitidis strain 38277     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 392066..402710
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AT729_RS02340 (AT729_00391) putP 392273..393799 (-) 1527 WP_002220352.1 sodium/proline symporter PutP -
  AT729_RS02350 (AT729_00392) - 394282..394602 (+) 321 WP_002216505.1 accessory factor UbiK family protein -
  AT729_RS02355 (AT729_00393) comM 394616..396112 (+) 1497 WP_079889363.1 YifB family Mg chelatase-like AAA ATPase Machinery gene
  AT729_RS02360 (AT729_00394) ftsN 396218..397063 (+) 846 WP_002241111.1 cell division protein FtsN -
  AT729_RS02365 (AT729_00395) dsbA1 397066..397710 (+) 645 WP_079889364.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  AT729_RS02370 (AT729_00396) - 397743..398564 (+) 822 WP_002222025.1 undecaprenyl-diphosphate phosphatase -
  AT729_RS02390 (AT729_00399) - 399137..400354 (-) 1218 WP_014575169.1 class I SAM-dependent methyltransferase -
  AT729_RS02395 (AT729_00400) mraZ 400633..401088 (+) 456 WP_002218779.1 division/cell wall cluster transcriptional repressor MraZ -
  AT729_RS02400 (AT729_00401) rsmH 401085..402071 (+) 987 WP_002218781.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH -
  AT729_RS02405 (AT729_00402) ftsL 402068..402331 (+) 264 WP_002232818.1 cell division protein FtsL -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 23950.87 Da        Isoelectric Point: 9.5696

>NTDB_id=182777 AT729_RS02365 WP_079889364.1 397066..397710(+) (dsbA1) [Neisseria meningitidis strain 38277]
MKLKHLLSLLLSAVLSAQAYALTEREDYLVLDKPIPQEQSGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPSDAYLRTEH
VVWQPEMLGLARMAAAVNLSGLKYQANPAVFKAVYEQKVHLEDRAVAGKWALSQKGFDGKKLMRVYDSPEAAAAASKMQK
LTEQYGIDNTPTVIVGGKYRVIFNNGFDGGVHTIKELVAKVREERKRQPPAVQK

Nucleotide


Download         Length: 645 bp        

>NTDB_id=182777 AT729_RS02365 WP_079889364.1 397066..397710(+) (dsbA1) [Neisseria meningitidis strain 38277]
ATGAAGCTCAAACATCTGTTGTCGCTGCTGCTGTCGGCAGTGTTGTCCGCGCAGGCATATGCCCTGACGGAAAGGGAAGA
CTATCTTGTGTTGGATAAACCCATTCCTCAAGAACAGTCGGGTAAAATTGAGGTTTTGGAATTTTTCGGCTATTTCTGCG
TACATTGCCATCATTTCGATCCTTTGTTATTGAAATTGGGCAAGGCATTGCCGTCTGATGCCTATTTGAGGACGGAGCAC
GTGGTCTGGCAGCCTGAAATGCTCGGTCTGGCCAGGATGGCGGCCGCCGTCAATTTGTCGGGTTTGAAATATCAGGCAAA
CCCTGCTGTGTTTAAAGCAGTTTACGAACAGAAGGTTCATTTGGAAGACAGGGCGGTGGCCGGAAAATGGGCTTTGTCTC
AAAAAGGCTTTGACGGTAAAAAACTGATGCGCGTTTATGACTCTCCCGAGGCCGCAGCAGCAGCATCAAAAATGCAGAAA
CTGACAGAACAATACGGTATTGACAACACGCCGACCGTTATTGTCGGCGGAAAATACCGCGTTATCTTCAATAATGGCTT
TGACGGCGGCGTTCATACGATTAAAGAATTGGTTGCCAAAGTCAGGGAAGAACGCAAGCGTCAGCCCCCTGCTGTACAGA
AATAG

Domains

Predicted by InterproScan.

Thioredoxin (Thioredoxin_4)

(42-179)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA1 Neisseria meningitidis MC58

55.08

87.383

0.481
  dsbA2 Neisseria meningitidis MC58

50.538

86.916

0.439

Multiple sequence alignment