Detailed information NTG0178297

Bioinformatically predicted

Overview

• Name: comA/nlmT
• Type: Regulator
• Locus tag: V471_RS04420
• Genome accession: NZ_CP015283
• Coordinates: 841160..843316 (+)
• Length: 718 a.a.
• NCBI ID: WP_002883725.1
• Uniprot ID: -
• Organism: Streptococcus salivarius strain ATCC 25975
• Function: transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 836160..848316

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V471_RS04395 (V471_04335)	-	837103..837834 (+)	732	WP_002883746.1	cyclase family protein	-
V471_RS11180	-	838086..838292 (+)	207	WP_230311015.1	transposase	-
V471_RS11295	-	838311..838439 (+)	129	WP_002883737.1	hypothetical protein	-
V471_RS04405 (V471_04345)	-	839205..840167 (+)	963	WP_002883806.1	thioredoxin family protein	-
V471_RS04410 (V471_04350)	-	840466..840687 (+)	222	WP_022495973.1	garvicin Q family class II bacteriocin	-
V471_RS04420 (V471_04355)	comA/nlmT	841160..843316 (+)	2157	WP_002883725.1	peptide cleavage/export ABC transporter	Regulator
V471_RS04425 (V471_04360)	-	843401..844378 (+)	978	WP_232326838.1	HlyD family efflux transporter periplasmic adaptor subunit	-
V471_RS11300	-	844466..844636 (-)	171	WP_157108264.1	GHKL domain-containing protein	-
V471_RS04430 (V471_04365)	-	844739..845125 (-)	387	WP_045768432.1	IS110 family transposase	-
V471_RS04435 (V471_04370)	-	845145..845906 (-)	762	WP_049529073.1	IS110 family transposase	-
V471_RS11065	-	846115..846624 (-)	510	WP_198166466.1	GHKL domain-containing protein	-
V471_RS04445 (V471_04380)	-	847278..848015 (-)	738	WP_002883766.1	LytR/AlgR family response regulator transcription factor	-

Sequence

Protein

• Length: 718 a.a.
• Molecular weight: 80860.91 Da
• Isoelectric Point: 8.5629

>NTDB_id=178297 V471_RS04420 WP_002883725.1 841160..843316(+) (comA/nlmT) [Streptococcus salivarius strain ATCC 25975]
MLRFRKTFVPQVDMMDCGVAALASISRYYGSDYSLAHLRELTKTTKEGTTALGLVQAAKKMGFETRAIQADMSLFEIKDI
SYPFIVHVAKDGRLQHYYVVYKNKKNHLIIGDPDPSVRITRMSKKGFEKEWTGVALFFAPEPSYKPYKDKKNGLLALVPL
IFKQRSLITNIVLASFLVTLINILGSYYLQVILDEYIPNQMQSTLGIISIGLVVTYILQQMMNFAREYLLTVLSQRLTID
VVLSYIRHIFELPMSFFATRQTGEVTSRFSDANSIIDALASTILSVFLDVSILMIVGGVLLLQNRNLFWLVLYSIPIYLI
IVYTFMKPFEKMNHDVMQSNAMVSSAIIEDINGIETIKSLTSEEVRYQKIDSDFVGYLDNSFKLSRLSILQTSIKQGAQL
ILNVLILWTGAQLVMANTISVGQLITFNMLLSYFTTPLENIINLQTKLQSAKVANARLNEVYLVDSEFQTFQENPYQEQL
LKGDITVSDLSYKYGFGRDALSDINLTIKQGEKVSFVGVSGSGKTTIAKLLVNFYKPYKGTISLNGQNIDQLDKRSLRQF
INYLPQQSYVFSGSLLDNLTLGADPSVVQEDILKACDIAEIRQDIEQMPMGFQTELSDGAGLSGGQKQRIALARALLTKS
RVLILDEATSGLDVLTEKKVVDNLLQLTDKTIIFIAHRLSIAQRTHRIFVMDQGRIVESGSHEELLSQAGFYQRLFQS

Nucleotide

• Length: 2157 bp

>NTDB_id=178297 V471_RS04420 WP_002883725.1 841160..843316(+) (comA/nlmT) [Streptococcus salivarius strain ATCC 25975]
ATGTTACGTTTTCGTAAAACTTTTGTGCCTCAGGTTGATATGATGGATTGTGGTGTGGCAGCTCTTGCTTCTATCTCTAG
GTATTATGGATCAGACTACTCCTTGGCTCATTTGAGAGAATTAACCAAAACAACCAAGGAGGGCACAACAGCCCTTGGTT
TAGTTCAGGCGGCTAAAAAAATGGGGTTTGAAACAAGGGCTATTCAAGCGGATATGTCTCTCTTTGAGATTAAAGATATA
TCCTATCCTTTTATCGTTCATGTCGCAAAAGATGGTAGACTACAACATTATTATGTGGTCTATAAAAATAAGAAAAATCA
TCTCATTATTGGAGATCCGGACCCTAGCGTCAGAATAACTAGGATGTCCAAAAAGGGGTTTGAAAAGGAGTGGACAGGTG
TCGCCTTATTTTTTGCACCAGAACCCAGCTATAAACCATACAAGGATAAGAAAAATGGTTTATTAGCTCTTGTTCCACTT
ATTTTCAAGCAAAGATCTCTTATCACCAATATTGTCTTAGCTAGTTTTTTAGTTACTTTGATCAATATATTAGGTTCTTA
TTACTTGCAGGTAATTTTGGATGAGTATATCCCGAATCAGATGCAGTCAACTTTGGGAATTATTTCAATTGGTTTGGTTG
TGACCTACATTTTGCAACAAATGATGAATTTTGCCAGGGAGTACTTACTGACTGTGCTGAGTCAACGTCTAACTATTGAT
GTGGTCTTATCCTATATTCGGCATATTTTTGAACTTCCCATGTCCTTTTTTGCGACGCGACAGACGGGAGAGGTAACTTC
ACGTTTTAGTGATGCCAATTCGATTATTGATGCGTTAGCATCGACCATCTTATCTGTTTTCTTAGATGTTTCAATTTTGA
TGATTGTGGGTGGTGTCCTTCTTCTCCAAAATAGGAATCTATTTTGGTTAGTCTTGTACTCCATACCGATTTATTTGATT
ATTGTCTATACCTTTATGAAGCCCTTTGAAAAGATGAACCATGATGTTATGCAAAGCAATGCTATGGTGAGCTCAGCGAT
AATTGAGGATATCAATGGGATTGAGACCATTAAATCTCTAACTAGTGAAGAGGTCCGTTATCAAAAGATTGATAGTGACT
TTGTAGGTTATTTGGATAACTCCTTTAAGTTGTCCAGATTATCTATCTTACAGACCTCTATAAAACAAGGGGCACAATTG
ATTTTAAATGTGCTCATTCTATGGACAGGAGCTCAGCTCGTTATGGCAAATACGATATCAGTTGGTCAGTTGATTACGTT
TAACATGCTCTTGTCCTATTTCACAACACCATTAGAAAATATCATCAATCTCCAAACCAAACTTCAGTCTGCAAAGGTGG
CCAATGCCCGTTTAAACGAGGTATATCTAGTGGATTCAGAGTTTCAAACGTTCCAAGAAAATCCATATCAAGAACAGCTA
CTTAAAGGTGATATCACTGTCTCTGACCTATCTTATAAATATGGTTTTGGTCGAGATGCTTTATCAGATATCAATCTAAC
TATCAAACAAGGAGAAAAAGTTAGTTTTGTGGGTGTTAGTGGGTCTGGTAAGACAACCATAGCCAAGCTCTTAGTAAACT
TTTATAAGCCTTACAAAGGTACGATTAGTTTAAATGGTCAAAATATCGATCAGTTGGATAAGAGATCCTTACGTCAGTTT
ATCAACTATCTTCCCCAACAGTCTTATGTTTTTAGTGGTAGTCTATTAGACAACCTAACTTTGGGAGCTGATCCTAGCGT
GGTGCAGGAGGATATTTTAAAAGCTTGCGATATAGCAGAGATACGTCAAGATATTGAACAAATGCCCATGGGATTTCAAA
CAGAACTTTCAGATGGAGCGGGTCTTTCAGGAGGACAAAAGCAGAGGATTGCTTTGGCTCGTGCCCTCCTAACGAAATCT
CGAGTGCTTATCTTAGATGAAGCGACGAGTGGATTGGATGTATTAACAGAGAAAAAAGTCGTTGATAACTTATTGCAACT
AACAGATAAGACGATAATTTTTATAGCCCATCGTTTGAGTATCGCTCAGCGAACACATCGTATTTTTGTTATGGATCAAG
GTCGCATAGTTGAGAGTGGTTCTCATGAGGAATTGTTGTCTCAAGCAGGCTTTTACCAGCGTCTCTTTCAAAGTTAA

Domains

Predicted by InterproScan.

• Peptidase C39 family (Peptidase_C39) (7-142)

• ABC transporter (ABC_tran) (501-650)

• ABC transporter transmembrane region (ABC_membrane) (169-438)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA/nlmT	Streptococcus mutans UA159	68.106	100	0.681
comA	Streptococcus mitis NCTC 12261	65.175	99.582	0.649
comA	Streptococcus pneumoniae D39	64.615	99.582	0.643
comA	Streptococcus pneumoniae R6	64.615	99.582	0.643
comA	Streptococcus pneumoniae Rx1	64.615	99.582	0.643
comA	Streptococcus mitis SK321	64.476	99.582	0.642
comA	Streptococcus gordonii str. Challis substr. CH1	63.448	100	0.641
comA	Streptococcus pneumoniae TIGR4	64.196	99.582	0.639