Detailed information NTG0178294

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: BE930_RS17790
• Genome accession: NZ_CP019029
• Coordinates: 2986890..2987915 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain Ecol_881
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2981890..2992915

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BE930_RS17780 (BE930_18170)	rpmE	2984121..2984333 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
BE930_RS17785 (BE930_18175)	priA	2984536..2986734 (+)	2199	WP_022646377.1	primosomal protein N'	Machinery gene
BE930_RS17790 (BE930_18180)	cytR	2986890..2987915 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
BE930_RS17795 (BE930_18185)	ftsN	2988007..2988966 (+)	960	WP_000068834.1	cell division protein FtsN	-
BE930_RS17800 (BE930_18190)	hslV	2989059..2989589 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
BE930_RS17805 (BE930_18195)	hslU	2989599..2990930 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
BE930_RS17810 (BE930_18200)	menA	2990997..2991923 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
BE930_RS17815 (BE930_18205)	rraA	2992016..2992501 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
BE930_RS17820 (BE930_18210)	zapB	2992586..2992831 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=178294 BE930_RS17790 WP_000644904.1 2986890..2987915(+) (cytR) [Escherichia coli strain Ecol_881]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=178294 BE930_RS17790 WP_000644904.1 2986890..2987915(+) (cytR) [Escherichia coli strain Ecol_881]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTACCTACCGTTCATATAGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGTGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628