Detailed information NTG0178293

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: V471_RS04225
• Genome accession: NZ_CP015283
• Coordinates: 804155..805054 (+)
• Length: 299 a.a.
• NCBI ID: WP_084871132.1
• Uniprot ID: -
• Organism: Streptococcus salivarius strain ATCC 25975
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 799155..810054

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
V471_RS04200 (V471_04145)	-	800472..800981 (+)	510	WP_049529100.1	tRNA (cytidine(34)-2'-O)-methyltransferase	-
V471_RS04205 (V471_04150)	-	801290..801847 (+)	558	WP_049529098.1	ECF transporter S component	-
V471_RS04210 (V471_04155)	-	801850..802500 (+)	651	WP_045001950.1	phosphatase PAP2 family protein	-
V471_RS04215 (V471_04160)	-	802614..803000 (-)	387	WP_002886743.1	IS110 family transposase	-
V471_RS04220 (V471_04165)	-	803020..803781 (-)	762	WP_157108258.1	IS110 family transposase	-
V471_RS04225 (V471_04170)	comR	804155..805054 (+)	900	WP_084871132.1	helix-turn-helix transcriptional regulator	Regulator
V471_RS04230 (V471_04175)	comA	805229..807325 (+)	2097	WP_049529069.1	peptide cleavage/export ABC transporter	Regulator
V471_RS04235 (V471_04180)	-	807435..807767 (+)	333	WP_013990041.1	DUF805 domain-containing protein	-
V471_RS11410 (V471_04185)	-	807819..808442 (-)	624	WP_228382825.1	hypothetical protein	-
V471_RS04245 (V471_04190)	-	808795..809283 (+)	489	Protein_773	PDGLE domain-containing protein	-

Sequence

Protein

• Length: 299 a.a.
• Molecular weight: 35144.63 Da
• Isoelectric Point: 5.8054

>NTDB_id=178293 V471_RS04225 WP_084871132.1 804155..805054(+) (comR) [Streptococcus salivarius strain ATCC 25975]
MNIKDSIGLRIKTERERQQMSREVLCLDGAELTVRQLIRIEKGESLPSLDRLSYIAKRLGKNMADLLDHDNITIPDEYYE
MKNRLIKFPTYRNPERIKDKLALIEEVYEKFFELLPEEELLTLDILENILSFTSWEESPKVEEIYEDLFEQVKRKKKFST
NDLLVIDYYFFHLYGRKQYDKKLFEKIVKRVLNQEIWTDDVHNIVLFNDLMAIAALKIFHNSFSDFLTVVDKALAVIEKS
QFYSYKPSVFVLKAKYELLHKGNKKKAAENYDKAIMFASVLEDSVLEESIKAGKAADGL

Nucleotide

• Length: 900 bp

>NTDB_id=178293 V471_RS04225 WP_084871132.1 804155..805054(+) (comR) [Streptococcus salivarius strain ATCC 25975]
TTGAACATAAAAGACAGCATTGGACTAAGAATCAAAACTGAGCGTGAACGTCAGCAGATGTCACGTGAAGTACTATGTTT
AGATGGTGCGGAGTTGACTGTTCGCCAGTTAATTCGCATTGAAAAAGGGGAATCTCTCCCGTCTTTAGATAGACTATCTT
ACATCGCAAAACGTCTAGGAAAAAATATGGCCGATCTATTGGATCATGACAATATTACTATCCCTGATGAATATTATGAG
ATGAAGAATCGTTTGATTAAGTTTCCAACGTACAGAAACCCAGAAAGAATAAAGGATAAACTTGCCTTAATTGAGGAAGT
CTATGAGAAATTCTTTGAACTTCTTCCAGAAGAAGAACTATTAACTCTAGATATTTTGGAAAATATATTAAGTTTCACTA
GTTGGGAGGAGAGTCCAAAGGTTGAGGAAATATATGAAGATTTATTTGAACAGGTCAAAAGGAAGAAGAAATTCTCAACT
AACGATTTATTAGTTATTGACTATTATTTCTTCCATCTTTATGGAAGAAAACAGTATGACAAAAAACTTTTTGAAAAAAT
CGTAAAGAGAGTATTAAATCAGGAAATTTGGACAGATGATGTCCATAATATTGTTTTATTTAATGATTTGATGGCTATTG
CTGCTTTGAAGATTTTTCACAATTCCTTTTCAGACTTCTTAACAGTTGTGGATAAAGCATTAGCCGTTATAGAAAAATCA
CAATTCTATAGCTATAAACCTAGTGTTTTTGTTCTCAAAGCTAAATATGAACTTCTGCATAAGGGAAATAAGAAAAAGGC
TGCAGAGAATTACGATAAGGCCATAATGTTTGCTTCCGTTTTAGAAGACTCGGTTTTAGAAGAAAGTATAAAAGCAGGGA
AAGCGGCAGATGGTTTATAG

Domains

Predicted by InterproScan.

• ComR tetratricopeptide (ComR_TPR) (75-292)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus salivarius strain HSISS4	97.324	100	0.973
comR	Streptococcus salivarius SK126	96.656	100	0.967
comR	Streptococcus thermophilus LMG 18311	94.314	100	0.943
comR	Streptococcus thermophilus LMD-9	93.645	100	0.936
comR/comR1	Streptococcus sobrinus strain NIDR 6715-7	42.14	100	0.421
comR/comR2	Streptococcus sobrinus strain NIDR 6715-7	42.14	100	0.421