Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | A4U85_RS01535 | Genome accession | NZ_CP015121 |
| Coordinates | 332956..333384 (+) | Length | 142 a.a. |
| NCBI ID | WP_000993713.1 | Uniprot ID | A0A6F8TC45 |
| Organism | Acinetobacter baumannii strain ab736 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 327956..338384
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A4U85_RS01515 (A4U85_01500) | - | 329344..330231 (+) | 888 | WP_001017317.1 | metal-dependent hydrolase | - |
| A4U85_RS01520 (A4U85_01505) | - | 330362..330952 (+) | 591 | WP_000846931.1 | LemA family protein | - |
| A4U85_RS01525 (A4U85_01510) | - | 330977..332059 (+) | 1083 | WP_001246543.1 | TPM domain-containing protein | - |
| A4U85_RS01530 (A4U85_01515) | - | 332053..332613 (+) | 561 | WP_000258949.1 | TPM domain-containing protein | - |
| A4U85_RS01535 (A4U85_01520) | pilA | 332956..333384 (+) | 429 | WP_000993713.1 | pilin | Machinery gene |
| A4U85_RS01540 (A4U85_01525) | - | 333440..334750 (+) | 1311 | WP_000913740.1 | O-antigen ligase family protein | - |
| A4U85_RS01545 (A4U85_01530) | - | 334857..336485 (+) | 1629 | WP_001195770.1 | PglL family O-oligosaccharyltransferase | - |
| A4U85_RS01550 (A4U85_01535) | bfr | 336528..336992 (-) | 465 | WP_000678117.1 | bacterioferritin | - |
| A4U85_RS01555 (A4U85_01540) | - | 337237..337431 (-) | 195 | WP_000289091.1 | bacterioferritin-associated ferredoxin | - |
| A4U85_RS01560 (A4U85_01545) | - | 337641..338024 (-) | 384 | WP_000090000.1 | RidA family protein | - |
Sequence
Protein
Download Length: 142 a.a. Molecular weight: 14515.55 Da Isoelectric Point: 6.1941
>NTDB_id=176886 A4U85_RS01535 WP_000993713.1 332956..333384(+) (pilA) [Acinetobacter baumannii strain ab736]
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQNYIAKSQASEAFTLADGLKTTINTNLQAGTCFAGGATAATAADQVAGKY
GDAEIGGTAPNCTITYTFKSSGVSTKLTSKQIVMNVSETGILTKNSSTNAPAELLPQSFTAS
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQNYIAKSQASEAFTLADGLKTTINTNLQAGTCFAGGATAATAADQVAGKY
GDAEIGGTAPNCTITYTFKSSGVSTKLTSKQIVMNVSETGILTKNSSTNAPAELLPQSFTAS
Nucleotide
Download Length: 429 bp
>NTDB_id=176886 A4U85_RS01535 WP_000993713.1 332956..333384(+) (pilA) [Acinetobacter baumannii strain ab736]
ATGAATGCACAAAAAGGTTTTACATTAATCGAACTTATGATCGTGGTTGCCATTATCGGTATTTTGGCGGCAATTGCGAT
TCCTGCGTATCAAAACTATATTGCTAAGTCACAAGCATCTGAGGCATTTACTCTAGCAGATGGATTGAAAACAACAATTA
ATACTAATTTACAGGCTGGGACATGTTTTGCTGGCGGCGCTACTGCAGCAACGGCCGCTGATCAAGTAGCTGGAAAATAT
GGTGATGCTGAGATTGGCGGAACTGCACCAAATTGTACGATCACCTATACATTCAAATCATCGGGTGTATCAACTAAACT
TACTTCTAAACAGATTGTAATGAATGTAAGCGAAACAGGTATTTTAACAAAGAATAGCAGTACTAATGCTCCAGCTGAGT
TACTTCCACAATCTTTTACAGCTTCATAA
ATGAATGCACAAAAAGGTTTTACATTAATCGAACTTATGATCGTGGTTGCCATTATCGGTATTTTGGCGGCAATTGCGAT
TCCTGCGTATCAAAACTATATTGCTAAGTCACAAGCATCTGAGGCATTTACTCTAGCAGATGGATTGAAAACAACAATTA
ATACTAATTTACAGGCTGGGACATGTTTTGCTGGCGGCGCTACTGCAGCAACGGCCGCTGATCAAGTAGCTGGAAAATAT
GGTGATGCTGAGATTGGCGGAACTGCACCAAATTGTACGATCACCTATACATTCAAATCATCGGGTGTATCAACTAAACT
TACTTCTAAACAGATTGTAATGAATGTAAGCGAAACAGGTATTTTAACAAAGAATAGCAGTACTAATGCTCCAGCTGAGT
TACTTCCACAATCTTTTACAGCTTCATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Acinetobacter nosocomialis M2 |
92.254 |
100 |
0.923 |
| pilA | Acinetobacter baumannii strain A118 |
44.828 |
100 |
0.458 |
| pilA | Pseudomonas aeruginosa PAK |
41.497 |
100 |
0.43 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
40.411 |
100 |
0.415 |
| pilA | Vibrio cholerae strain A1552 |
40.411 |
100 |
0.415 |
| pilA | Vibrio cholerae C6706 |
40.411 |
100 |
0.415 |