Detailed information
Bioinformatically predicted
Overview
| Name | comEA/comE1 | Type | Machinery gene |
| Locus tag | A4G16_RS07645 | Genome accession | NZ_CP015030 |
| Coordinates | 1591566..1591910 (+) | Length | 114 a.a. |
| NCBI ID | WP_165889385.1 | Uniprot ID | A0A6G8JJ63 |
| Organism | Mannheimia granulomatis strain B 234/94 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1586566..1596910
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A4G16_RS07620 (A4G16_07505) | rpsL | 1586927..1587301 (-) | 375 | WP_005543325.1 | 30S ribosomal protein S12 | - |
| A4G16_RS07625 (A4G16_07510) | rfaC | 1587421..1588380 (-) | 960 | WP_165889381.1 | lipopolysaccharide heptosyltransferase RfaC | - |
| A4G16_RS07630 (A4G16_07515) | waaF | 1588451..1589485 (-) | 1035 | WP_165889382.1 | lipopolysaccharide heptosyltransferase II | - |
| A4G16_RS07635 (A4G16_07520) | - | 1589517..1589933 (-) | 417 | WP_165889383.1 | MliC family protein | - |
| A4G16_RS07640 (A4G16_07525) | - | 1589989..1591269 (-) | 1281 | WP_165889384.1 | LysM-like peptidoglycan-binding domain-containing protein | - |
| A4G16_RS07645 (A4G16_07530) | comEA/comE1 | 1591566..1591910 (+) | 345 | WP_165889385.1 | ComEA family DNA-binding protein | Machinery gene |
| A4G16_RS07650 (A4G16_07535) | asd | 1592076..1592966 (+) | 891 | WP_165889386.1 | archaetidylserine decarboxylase | - |
| A4G16_RS07655 (A4G16_07540) | gshAB | 1593133..1595409 (+) | 2277 | WP_165889921.1 | bifunctional glutamate--cysteine ligase GshA/glutathione synthetase GshB | - |
| A4G16_RS07660 (A4G16_07545) | manX | 1595699..1596673 (+) | 975 | WP_165889387.1 | PTS mannose transporter subunit IIAB | - |
Sequence
Protein
Download Length: 114 a.a. Molecular weight: 12325.02 Da Isoelectric Point: 9.6917
>NTDB_id=176306 A4G16_RS07645 WP_165889385.1 1591566..1591910(+) (comEA/comE1) [Mannheimia granulomatis strain B 234/94]
MKKIKAFTLSLLIGLSSHTFAQTQPITNTEQTSPTQAVEQVTNQSKITPNAVNINLASAAELQDKLVGIGEKKAQAIVDY
RTKNGNFKSIEQLTEVSGIGQATLDKNRANIVLE
MKKIKAFTLSLLIGLSSHTFAQTQPITNTEQTSPTQAVEQVTNQSKITPNAVNINLASAAELQDKLVGIGEKKAQAIVDY
RTKNGNFKSIEQLTEVSGIGQATLDKNRANIVLE
Nucleotide
Download Length: 345 bp
>NTDB_id=176306 A4G16_RS07645 WP_165889385.1 1591566..1591910(+) (comEA/comE1) [Mannheimia granulomatis strain B 234/94]
ATGAAAAAAATAAAAGCATTTACCTTAAGCTTATTAATCGGTTTATCCAGCCATACTTTCGCCCAAACCCAACCTATAAC
AAATACGGAACAAACATCGCCTACTCAAGCTGTGGAACAAGTTACAAACCAAAGTAAAATCACCCCCAATGCGGTTAACA
TTAACCTAGCGAGTGCAGCCGAACTACAAGATAAATTAGTTGGTATAGGTGAGAAAAAAGCACAAGCGATTGTAGATTAC
CGCACTAAAAACGGTAATTTTAAAAGCATAGAACAACTTACTGAAGTCTCAGGAATTGGACAAGCAACCTTAGACAAAAA
TCGCGCTAATATTGTTTTAGAATAA
ATGAAAAAAATAAAAGCATTTACCTTAAGCTTATTAATCGGTTTATCCAGCCATACTTTCGCCCAAACCCAACCTATAAC
AAATACGGAACAAACATCGCCTACTCAAGCTGTGGAACAAGTTACAAACCAAAGTAAAATCACCCCCAATGCGGTTAACA
TTAACCTAGCGAGTGCAGCCGAACTACAAGATAAATTAGTTGGTATAGGTGAGAAAAAAGCACAAGCGATTGTAGATTAC
CGCACTAAAAACGGTAATTTTAAAAGCATAGAACAACTTACTGAAGTCTCAGGAATTGGACAAGCAACCTTAGACAAAAA
TCGCGCTAATATTGTTTTAGAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
60 |
100 |
0.605 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
47.273 |
96.491 |
0.456 |
| comEA | Vibrio cholerae C6706 |
46.847 |
97.368 |
0.456 |
| comEA | Vibrio cholerae strain A1552 |
46.847 |
97.368 |
0.456 |
| comEA | Vibrio campbellii strain DS40M4 |
42.056 |
93.86 |
0.395 |
| comEA | Lactococcus lactis subsp. cremoris KW2 |
53.012 |
72.807 |
0.386 |