Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   A2G56_RS07250 Genome accession   NZ_CP014835
Coordinates   1571284..1572501 (-) Length   405 a.a.
NCBI ID   WP_062710855.1    Uniprot ID   -
Organism   Streptococcus halotolerans strain HTS9     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1566284..1577501
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A2G56_RS07225 - 1566825..1567196 (-) 372 WP_082785127.1 helix-turn-helix domain-containing protein -
  A2G56_RS07230 - 1567317..1567520 (-) 204 WP_062710843.1 DUF951 domain-containing protein -
  A2G56_RS07235 dnaN 1567604..1568740 (-) 1137 WP_062710850.1 DNA polymerase III subunit beta -
  A2G56_RS07240 dnaA 1568894..1570261 (-) 1368 WP_062710851.1 chromosomal replication initiator protein DnaA -
  A2G56_RS07245 spo0J 1570463..1571230 (-) 768 WP_062710852.1 ParB/RepB/Spo0J family partition protein Regulator
  A2G56_RS07250 htrA 1571284..1572501 (-) 1218 WP_062710855.1 S1C family serine protease Regulator
  A2G56_RS07255 rlmH 1572732..1573211 (+) 480 WP_062710858.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  A2G56_RS07270 - 1573628..1573831 (-) 204 WP_062710861.1 ISL3 family transposase -

Sequence


Protein


Download         Length: 405 a.a.        Molecular weight: 43007.25 Da        Isoelectric Point: 6.2924

>NTDB_id=174493 A2G56_RS07250 WP_062710855.1 1571284..1572501(-) (htrA) [Streptococcus halotolerans strain HTS9]
MTNKSTNSFKRTLTTIIVALISGLLGAFMFFYFSENLIPSSSNSHQKTRTSNVVYNNTTDTTKAAKKVQDAVVSVINYRK
KSNSSLNDLYSQVFGNDQEKNSSDELSVYSEGSGVIYKKQDGSAYVVTNNHVIDGAESIEIMLSDGTKVVGKLVGSDTYS
DLAVVKISGKKVSTVAEFANSDKLNVGETAIAMGSPLGTEYANTVTQGIVSSLSRTVTLKNDEGETISTNAIQTDAAINP
GNSGGALINIEGQVIGINSSKISSTSTAGEAVEGMGFAIPANDVLKIINQLEKNGQVTRPALGISMANLSDLSTSVISEL
KIPESVTAGIVVASVQDNMPASGKLKRYDVITKINNKDVTSTSDLQSILYGHDIGDTIKVTYYRGKDKQTAAIKLSKSTK
DLENN

Nucleotide


Download         Length: 1218 bp        

>NTDB_id=174493 A2G56_RS07250 WP_062710855.1 1571284..1572501(-) (htrA) [Streptococcus halotolerans strain HTS9]
TTGACAAACAAATCAACCAATAGCTTTAAACGAACACTGACAACCATTATAGTTGCTCTGATTTCTGGTTTACTAGGAGC
CTTTATGTTTTTTTATTTCTCAGAAAACTTAATACCATCTTCAAGTAATTCCCACCAAAAAACTAGAACTAGCAATGTTG
TCTACAATAATACAACCGACACAACCAAAGCAGCTAAAAAAGTACAAGACGCTGTCGTTTCCGTTATCAACTATCGAAAA
AAATCCAATTCCTCTTTAAATGACCTCTATTCACAAGTCTTTGGCAATGACCAAGAAAAAAATTCCAGTGATGAACTTAG
CGTGTACAGTGAGGGGTCTGGGGTTATCTATAAAAAACAAGATGGTTCAGCTTATGTTGTTACTAATAACCACGTTATTG
ATGGAGCTGAAAGTATCGAAATCATGCTTTCTGATGGTACTAAAGTTGTCGGAAAGTTAGTTGGTTCCGATACTTACTCT
GACCTAGCTGTTGTCAAAATTTCAGGTAAAAAGGTATCAACTGTTGCCGAATTTGCTAATTCAGATAAACTTAATGTCGG
CGAAACAGCCATCGCTATGGGAAGCCCACTCGGTACCGAGTATGCTAACACTGTTACTCAAGGGATTGTTTCCAGTCTAA
GTCGTACGGTGACCCTTAAAAATGATGAAGGTGAGACCATTTCAACCAATGCCATTCAAACAGATGCTGCTATCAACCCT
GGTAACTCTGGAGGAGCGCTCATTAACATTGAAGGCCAAGTTATTGGAATCAATTCAAGTAAAATTTCTTCAACTTCAAC
AGCTGGCGAAGCCGTAGAAGGAATGGGATTTGCTATTCCAGCTAATGATGTACTAAAAATTATCAATCAGTTAGAAAAGA
ATGGCCAAGTAACACGACCTGCTCTTGGTATTTCTATGGCTAATTTGAGCGATCTCTCAACCAGTGTAATCTCAGAACTA
AAAATCCCTGAAAGTGTCACAGCTGGTATTGTTGTCGCTTCAGTTCAAGATAATATGCCCGCTTCAGGTAAACTCAAACG
CTACGATGTTATTACTAAAATCAATAACAAAGACGTCACATCAACAAGTGATCTCCAAAGCATTCTTTATGGACATGATA
TTGGAGATACTATCAAAGTGACTTACTACCGTGGTAAAGATAAACAAACAGCCGCTATTAAATTAAGCAAGTCAACCAAA
GACTTAGAAAATAACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

62.899

100

0.632

  htrA Streptococcus pneumoniae Rx1

59.241

97.531

0.578

  htrA Streptococcus pneumoniae D39

59.241

97.531

0.578

  htrA Streptococcus pneumoniae R6

59.241

97.531

0.578

  htrA Streptococcus pneumoniae TIGR4

59.241

97.531

0.578

  htrA Streptococcus mitis NCTC 12261

59.847

96.543

0.578

  htrA Streptococcus gordonii str. Challis substr. CH1

57.816

99.506

0.575


Multiple sequence alignment