Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   A2G56_RS07245 Genome accession   NZ_CP014835
Coordinates   1570463..1571230 (-) Length   255 a.a.
NCBI ID   WP_062710852.1    Uniprot ID   -
Organism   Streptococcus halotolerans strain HTS9     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1565463..1576230
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A2G56_RS07220 ychF 1565616..1566731 (-) 1116 WP_062710836.1 redox-regulated ATPase YchF -
  A2G56_RS07225 - 1566825..1567196 (-) 372 WP_082785127.1 helix-turn-helix domain-containing protein -
  A2G56_RS07230 - 1567317..1567520 (-) 204 WP_062710843.1 DUF951 domain-containing protein -
  A2G56_RS07235 dnaN 1567604..1568740 (-) 1137 WP_062710850.1 DNA polymerase III subunit beta -
  A2G56_RS07240 dnaA 1568894..1570261 (-) 1368 WP_062710851.1 chromosomal replication initiator protein DnaA -
  A2G56_RS07245 spo0J 1570463..1571230 (-) 768 WP_062710852.1 ParB/RepB/Spo0J family partition protein Regulator
  A2G56_RS07250 htrA 1571284..1572501 (-) 1218 WP_062710855.1 S1C family serine protease Regulator
  A2G56_RS07255 rlmH 1572732..1573211 (+) 480 WP_062710858.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  A2G56_RS07270 - 1573628..1573831 (-) 204 WP_062710861.1 ISL3 family transposase -

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29037.22 Da        Isoelectric Point: 7.6073

>NTDB_id=174492 A2G56_RS07245 WP_062710852.1 1570463..1571230(-) (spo0J) [Streptococcus halotolerans strain HTS9]
MTDILKDILISDITTNPNQPRQIFKEEDIKALAESIANNGLIQPIIVRPSDIIGYELIAGERRLRAHQFLGKSHIQAIIT
QKSYQESMKQALIENLQRADLNPIEEAKAYQNIIDKLGMTHQELAKSIGKSRPYISNQLRLLQLSSSWQTAIEEGLATPG
HARLILPLSKEEQNFWLTEITGHQISVHQLEKSLKKEDKQPTSKEKTIFQNHLEEELQKSLGLSVSISGFQQKKGHLSIT
FSNEEEFNRIINKLK

Nucleotide


Download         Length: 768 bp        

>NTDB_id=174492 A2G56_RS07245 WP_062710852.1 1570463..1571230(-) (spo0J) [Streptococcus halotolerans strain HTS9]
ATGACAGATATTTTAAAAGACATTTTGATCAGTGATATCACGACTAACCCCAATCAGCCAAGACAAATTTTCAAAGAAGA
AGACATCAAAGCACTTGCTGAATCCATTGCAAATAATGGCTTAATCCAGCCCATTATCGTTAGGCCATCAGATATTATCG
GTTATGAGTTAATAGCTGGTGAAAGACGACTAAGGGCTCATCAATTTCTTGGTAAGAGCCATATTCAGGCAATCATTACT
CAAAAAAGCTATCAAGAGAGTATGAAACAAGCTCTTATTGAGAATCTTCAAAGAGCCGATTTAAATCCCATTGAAGAAGC
CAAAGCTTATCAAAATATCATCGATAAACTCGGAATGACTCATCAAGAACTAGCCAAATCCATTGGGAAATCTAGGCCCT
ATATTTCAAACCAATTACGCCTATTACAGCTCTCTTCTTCTTGGCAGACAGCCATTGAAGAAGGTCTAGCTACGCCAGGC
CATGCTAGGCTGATTCTTCCCCTCTCTAAAGAAGAACAGAACTTTTGGCTAACAGAAATCACTGGTCATCAAATAAGCGT
TCATCAGTTGGAAAAAAGTCTCAAAAAAGAAGACAAGCAGCCAACTTCAAAAGAAAAAACGATTTTCCAAAACCATTTGG
AAGAAGAACTTCAAAAATCACTTGGCTTGTCAGTCAGCATCTCAGGTTTTCAACAAAAGAAAGGTCACCTTTCCATTACC
TTCTCCAACGAAGAAGAATTCAACAGAATTATCAACAAGCTAAAATAA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(8-95)

HTH domain found in ParB protein (HTH_ParB)

(149-195)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

53.333

100

0.533

Multiple sequence alignment