Detailed information
Bioinformatically predicted
Overview
| Name | ciaR | Type | Regulator |
| Locus tag | A2G56_RS02325 | Genome accession | NZ_CP014835 |
| Coordinates | 508713..509384 (+) | Length | 223 a.a. |
| NCBI ID | WP_062708468.1 | Uniprot ID | - |
| Organism | Streptococcus halotolerans strain HTS9 | ||
| Function | repress competence development (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| IS/Tn | 507118..508377 | 508713..509384 | flank | 336 |
Gene organization within MGE regions
Location: 507118..509384
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A2G56_RS02320 | - | 507118..508377 (-) | 1260 | WP_062708466.1 | ISL3 family transposase | - |
| A2G56_RS02325 | ciaR | 508713..509384 (+) | 672 | WP_062708468.1 | response regulator transcription factor | Regulator |
Sequence
Protein
Download Length: 223 a.a. Molecular weight: 25237.95 Da Isoelectric Point: 4.2703
>NTDB_id=174455 A2G56_RS02325 WP_062708468.1 508713..509384(+) (ciaR) [Streptococcus halotolerans strain HTS9]
MIKLLLVEDDLSLSNSVFDFLDDFADVMQVFDGEEGLYEAESGVYDLILLDLMLPEKNGFQVLKELREKGITTPVLIMTA
KESLDDKGHGFELGADDYLTKPFYLEELKMRIQALLKRSGKLTNNNIVYGDLTVDTSINSVTVDGNNVELLGKEFELLLY
FLQNQNVILPKTQIFDRLWGFDSDTTISVVEVYVSKIRKKLKGTSFAENLQTLRSVGYILKDA
MIKLLLVEDDLSLSNSVFDFLDDFADVMQVFDGEEGLYEAESGVYDLILLDLMLPEKNGFQVLKELREKGITTPVLIMTA
KESLDDKGHGFELGADDYLTKPFYLEELKMRIQALLKRSGKLTNNNIVYGDLTVDTSINSVTVDGNNVELLGKEFELLLY
FLQNQNVILPKTQIFDRLWGFDSDTTISVVEVYVSKIRKKLKGTSFAENLQTLRSVGYILKDA
Nucleotide
Download Length: 672 bp
>NTDB_id=174455 A2G56_RS02325 WP_062708468.1 508713..509384(+) (ciaR) [Streptococcus halotolerans strain HTS9]
ATGATAAAATTGCTCTTGGTTGAAGATGATTTGAGTTTATCCAATTCGGTTTTTGATTTTCTAGATGATTTTGCAGATGT
AATGCAGGTTTTCGACGGTGAAGAAGGTTTGTATGAAGCTGAATCTGGCGTTTATGATCTTATTTTGTTAGATTTGATGC
TTCCTGAAAAAAATGGCTTCCAGGTTTTGAAAGAATTGCGAGAAAAAGGAATTACGACACCCGTTCTTATCATGACAGCC
AAAGAAAGCCTAGATGATAAAGGTCATGGTTTTGAACTGGGGGCTGATGATTATTTAACAAAACCATTTTACCTCGAAGA
ACTAAAAATGCGTATTCAGGCGCTGTTGAAACGCTCTGGTAAACTAACCAATAATAACATTGTTTACGGAGATCTTACAG
TTGATACTTCGATCAATAGTGTTACGGTCGATGGTAACAATGTAGAACTGTTAGGGAAAGAATTTGAATTGTTGCTGTAT
TTTCTACAAAACCAAAACGTTATTTTGCCTAAAACACAGATTTTTGATCGACTTTGGGGTTTTGACAGTGACACGACTAT
CTCAGTCGTTGAAGTTTACGTTTCAAAAATTCGTAAAAAACTAAAGGGTACAAGTTTTGCGGAAAACTTACAAACCTTAA
GAAGTGTTGGCTACATTTTAAAAGATGCATAA
ATGATAAAATTGCTCTTGGTTGAAGATGATTTGAGTTTATCCAATTCGGTTTTTGATTTTCTAGATGATTTTGCAGATGT
AATGCAGGTTTTCGACGGTGAAGAAGGTTTGTATGAAGCTGAATCTGGCGTTTATGATCTTATTTTGTTAGATTTGATGC
TTCCTGAAAAAAATGGCTTCCAGGTTTTGAAAGAATTGCGAGAAAAAGGAATTACGACACCCGTTCTTATCATGACAGCC
AAAGAAAGCCTAGATGATAAAGGTCATGGTTTTGAACTGGGGGCTGATGATTATTTAACAAAACCATTTTACCTCGAAGA
ACTAAAAATGCGTATTCAGGCGCTGTTGAAACGCTCTGGTAAACTAACCAATAATAACATTGTTTACGGAGATCTTACAG
TTGATACTTCGATCAATAGTGTTACGGTCGATGGTAACAATGTAGAACTGTTAGGGAAAGAATTTGAATTGTTGCTGTAT
TTTCTACAAAACCAAAACGTTATTTTGCCTAAAACACAGATTTTTGATCGACTTTGGGGTTTTGACAGTGACACGACTAT
CTCAGTCGTTGAAGTTTACGTTTCAAAAATTCGTAAAAAACTAAAGGGTACAAGTTTTGCGGAAAACTTACAAACCTTAA
GAAGTGTTGGCTACATTTTAAAAGATGCATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ciaR | Streptococcus mutans UA159 |
89.238 |
100 |
0.892 |
| ciaR | Streptococcus pneumoniae Rx1 |
88.341 |
100 |
0.883 |
| ciaR | Streptococcus pneumoniae D39 |
88.341 |
100 |
0.883 |
| ciaR | Streptococcus pneumoniae R6 |
88.341 |
100 |
0.883 |
| ciaR | Streptococcus pneumoniae TIGR4 |
88.341 |
100 |
0.883 |
| vicR | Streptococcus mutans UA159 |
35.622 |
100 |
0.372 |
| covR | Lactococcus lactis subsp. lactis strain DGCC12653 |
36.444 |
100 |
0.368 |
| micA | Streptococcus pneumoniae Cp1015 |
34.764 |
100 |
0.363 |