Detailed information
Bioinformatically predicted
Overview
| Name | pilR | Type | Regulator |
| Locus tag | AXF37_RS06060 | Genome accession | NZ_CP014257 |
| Coordinates | 1329139..1330467 (+) | Length | 442 a.a. |
| NCBI ID | WP_027221416.1 | Uniprot ID | A0AAX2IUW0 |
| Organism | Legionella pneumophila subsp. pascullei strain D-7119 | ||
| Function | regulate pilin expression (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1324139..1335467
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AXF37_RS06040 (AXF37_06035) | amrS | 1324268..1325344 (+) | 1077 | WP_027221412.1 | AmmeMemoRadiSam system radical SAM enzyme | - |
| AXF37_RS06045 (AXF37_06040) | - | 1325403..1325822 (+) | 420 | WP_027221413.1 | lpg1171 family Dot/Icm T4SS effector | - |
| AXF37_RS06050 (AXF37_06045) | lidL | 1325972..1327456 (+) | 1485 | WP_080273046.1 | Dot/Icm type IV secretion system effector LidL | - |
| AXF37_RS06055 (AXF37_06050) | - | 1327556..1329142 (+) | 1587 | WP_027221415.1 | sensor histidine kinase | - |
| AXF37_RS06060 (AXF37_06055) | pilR | 1329139..1330467 (+) | 1329 | WP_027221416.1 | sigma-54-dependent transcriptional regulator | Regulator |
| AXF37_RS06065 (AXF37_06060) | - | 1330731..1330976 (+) | 246 | WP_011213531.1 | hypothetical protein | - |
| AXF37_RS06070 (AXF37_06065) | - | 1331108..1332544 (-) | 1437 | WP_027221417.1 | M48 family metalloprotease | - |
| AXF37_RS06075 (AXF37_06070) | ribD | 1332607..1333680 (+) | 1074 | WP_027221418.1 | bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD | - |
| AXF37_RS06080 (AXF37_06075) | - | 1333665..1334279 (+) | 615 | WP_027221419.1 | riboflavin synthase | - |
Sequence
Protein
Download Length: 442 a.a. Molecular weight: 49165.14 Da Isoelectric Point: 6.5929
>NTDB_id=169858 AXF37_RS06060 WP_027221416.1 1329139..1330467(+) (pilR) [Legionella pneumophila subsp. pascullei strain D-7119]
MTKSKVLVIDDEPDIRELLTLTLSRMGLACDAVSDFKQGLEHIKQNYYSLVLTDMRLPDGDGIEIVKFIQKYKPQLPVAV
ITAYGNVEGAVNTLKAGAFDYVSKPVDLKMLRDLVKTALSMQNPSTENPDEGLLVGESLVMQQLRESIHKLARSQAPVFI
QGDSGVGKELVAQLIHANGPRKDKPFIPVNCGAIPGELMESEFFGHKKGSFTGAISDKTGLFVAAHGGTLFLDEIAELPL
AMQVKLLRAIQEKAIKPIGELYEIPVDVRILSASHKSLIEEINAGKFRQDLYYRINVIELRVPTLMERLSDIPCLTEAIL
KKLSKNQNRSLVKINPACFEILSHYHFPGNVRELENILERAMAMCEEEIIEPGDLHLPRTTITPVVAASPVSTNLNGYLQ
DQEKELILDALEKTKWNRTAAAQLLGVSFRTLRYRLKKLGLD
MTKSKVLVIDDEPDIRELLTLTLSRMGLACDAVSDFKQGLEHIKQNYYSLVLTDMRLPDGDGIEIVKFIQKYKPQLPVAV
ITAYGNVEGAVNTLKAGAFDYVSKPVDLKMLRDLVKTALSMQNPSTENPDEGLLVGESLVMQQLRESIHKLARSQAPVFI
QGDSGVGKELVAQLIHANGPRKDKPFIPVNCGAIPGELMESEFFGHKKGSFTGAISDKTGLFVAAHGGTLFLDEIAELPL
AMQVKLLRAIQEKAIKPIGELYEIPVDVRILSASHKSLIEEINAGKFRQDLYYRINVIELRVPTLMERLSDIPCLTEAIL
KKLSKNQNRSLVKINPACFEILSHYHFPGNVRELENILERAMAMCEEEIIEPGDLHLPRTTITPVVAASPVSTNLNGYLQ
DQEKELILDALEKTKWNRTAAAQLLGVSFRTLRYRLKKLGLD
Nucleotide
Download Length: 1329 bp
>NTDB_id=169858 AXF37_RS06060 WP_027221416.1 1329139..1330467(+) (pilR) [Legionella pneumophila subsp. pascullei strain D-7119]
ATGACTAAAAGCAAAGTGCTCGTTATAGATGACGAACCAGACATAAGAGAGTTATTAACTCTTACTTTATCGCGCATGGG
CTTAGCTTGCGATGCGGTGTCTGATTTTAAGCAGGGCTTAGAACATATAAAACAAAATTATTATTCTTTGGTTTTAACCG
ACATGCGTTTGCCTGATGGAGATGGTATAGAAATTGTTAAATTCATTCAGAAATACAAACCACAGTTGCCAGTTGCTGTC
ATTACCGCTTATGGAAATGTCGAGGGTGCGGTCAATACTTTAAAGGCTGGGGCATTTGATTATGTATCCAAACCCGTAGA
CTTAAAGATGCTTAGAGATCTAGTCAAGACCGCATTATCCATGCAAAATCCGTCTACCGAAAATCCTGATGAAGGTTTAT
TGGTTGGTGAGAGTTTGGTAATGCAACAACTTCGTGAAAGCATCCATAAATTAGCTCGCAGTCAGGCACCGGTTTTTATT
CAAGGTGATTCAGGTGTTGGGAAAGAACTTGTTGCTCAGCTGATTCATGCTAATGGTCCCAGAAAAGATAAGCCATTTAT
TCCTGTAAATTGTGGTGCTATACCTGGTGAGTTGATGGAATCAGAGTTTTTTGGCCATAAAAAAGGGAGCTTTACAGGAG
CGATTTCTGATAAAACAGGGTTATTTGTTGCGGCTCATGGTGGCACTTTGTTTCTTGATGAAATCGCCGAGCTTCCTCTC
GCCATGCAGGTTAAATTACTACGTGCAATTCAAGAGAAGGCAATTAAACCAATAGGTGAGTTATATGAAATTCCGGTGGA
TGTACGCATTCTAAGTGCGAGCCATAAAAGTTTGATTGAGGAAATCAATGCAGGGAAGTTTCGTCAAGATTTGTATTATC
GAATTAATGTGATTGAATTGCGTGTCCCAACTTTAATGGAAAGACTTTCTGATATTCCTTGCCTGACGGAGGCGATATTA
AAAAAATTATCTAAAAATCAAAATAGAAGCCTGGTCAAAATCAATCCAGCCTGTTTTGAAATATTGAGTCATTATCATTT
TCCAGGGAATGTCAGAGAATTGGAGAATATCCTCGAGCGTGCCATGGCTATGTGTGAGGAAGAGATCATAGAACCAGGCG
ATTTACATTTGCCTAGAACGACAATAACCCCAGTTGTTGCTGCATCCCCAGTGTCAACTAACTTAAATGGTTATCTTCAG
GATCAGGAAAAGGAATTAATTCTAGATGCTCTTGAGAAAACAAAATGGAACAGGACAGCCGCTGCACAACTATTAGGTGT
CAGCTTCCGCACTCTCCGTTATCGATTAAAAAAACTGGGCCTTGATTAG
ATGACTAAAAGCAAAGTGCTCGTTATAGATGACGAACCAGACATAAGAGAGTTATTAACTCTTACTTTATCGCGCATGGG
CTTAGCTTGCGATGCGGTGTCTGATTTTAAGCAGGGCTTAGAACATATAAAACAAAATTATTATTCTTTGGTTTTAACCG
ACATGCGTTTGCCTGATGGAGATGGTATAGAAATTGTTAAATTCATTCAGAAATACAAACCACAGTTGCCAGTTGCTGTC
ATTACCGCTTATGGAAATGTCGAGGGTGCGGTCAATACTTTAAAGGCTGGGGCATTTGATTATGTATCCAAACCCGTAGA
CTTAAAGATGCTTAGAGATCTAGTCAAGACCGCATTATCCATGCAAAATCCGTCTACCGAAAATCCTGATGAAGGTTTAT
TGGTTGGTGAGAGTTTGGTAATGCAACAACTTCGTGAAAGCATCCATAAATTAGCTCGCAGTCAGGCACCGGTTTTTATT
CAAGGTGATTCAGGTGTTGGGAAAGAACTTGTTGCTCAGCTGATTCATGCTAATGGTCCCAGAAAAGATAAGCCATTTAT
TCCTGTAAATTGTGGTGCTATACCTGGTGAGTTGATGGAATCAGAGTTTTTTGGCCATAAAAAAGGGAGCTTTACAGGAG
CGATTTCTGATAAAACAGGGTTATTTGTTGCGGCTCATGGTGGCACTTTGTTTCTTGATGAAATCGCCGAGCTTCCTCTC
GCCATGCAGGTTAAATTACTACGTGCAATTCAAGAGAAGGCAATTAAACCAATAGGTGAGTTATATGAAATTCCGGTGGA
TGTACGCATTCTAAGTGCGAGCCATAAAAGTTTGATTGAGGAAATCAATGCAGGGAAGTTTCGTCAAGATTTGTATTATC
GAATTAATGTGATTGAATTGCGTGTCCCAACTTTAATGGAAAGACTTTCTGATATTCCTTGCCTGACGGAGGCGATATTA
AAAAAATTATCTAAAAATCAAAATAGAAGCCTGGTCAAAATCAATCCAGCCTGTTTTGAAATATTGAGTCATTATCATTT
TCCAGGGAATGTCAGAGAATTGGAGAATATCCTCGAGCGTGCCATGGCTATGTGTGAGGAAGAGATCATAGAACCAGGCG
ATTTACATTTGCCTAGAACGACAATAACCCCAGTTGTTGCTGCATCCCCAGTGTCAACTAACTTAAATGGTTATCTTCAG
GATCAGGAAAAGGAATTAATTCTAGATGCTCTTGAGAAAACAAAATGGAACAGGACAGCCGCTGCACAACTATTAGGTGT
CAGCTTCCGCACTCTCCGTTATCGATTAAAAAAACTGGGCCTTGATTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilR | Pseudomonas aeruginosa PAK |
59.326 |
100 |
0.597 |
| pilR | Acinetobacter baumannii strain A118 |
48.802 |
100 |
0.507 |