Detailed information NTG0169504

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: AXA63_RS16615
• Genome accession: NZ_CP014215
• Coordinates: 3428954..3430012 (-)
• Length: 352 a.a.
• NCBI ID: WP_002014066.1
• Uniprot ID: N9LI98
• Organism: Acinetobacter baumannii strain YU-R612
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3423954..3435012

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AXA63_RS16590 (AXA63_16590)	aroK	3424227..3424796 (-)	570	WP_000643712.1	shikimate kinase AroK	-
AXA63_RS16595 (AXA63_16595)	pilQ	3424808..3426970 (-)	2163	WP_033503048.1	type IV pilus secretin PilQ family protein	Machinery gene
AXA63_RS16600 (AXA63_16600)	pilP	3427038..3427565 (-)	528	WP_000695065.1	pilus assembly protein PilP	Machinery gene
AXA63_RS16605 (AXA63_16605)	pilO	3427576..3428316 (-)	741	WP_000076101.1	type 4a pilus biogenesis protein PilO	Machinery gene
AXA63_RS16610 (AXA63_16610)	pilN	3428313..3428954 (-)	642	WP_000201227.1	PilN domain-containing protein	Machinery gene
AXA63_RS16615 (AXA63_16615)	pilM	3428954..3430012 (-)	1059	WP_002014066.1	pilus assembly protein PilM	Machinery gene
AXA63_RS16620 (AXA63_16620)	ponA	3430175..3432730 (+)	2556	WP_060853640.1	penicillin-binding protein PBP1a	-
AXA63_RS16625 (AXA63_16625)	-	3432748..3433572 (-)	825	WP_002019666.1	putative RNA methyltransferase	-
AXA63_RS16630 (AXA63_16630)	-	3433575..3433907 (-)	333	WP_000169594.1	hypothetical protein	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39032.59 Da
• Isoelectric Point: 4.4618

>NTDB_id=169504 AXA63_RS16615 WP_002014066.1 3428954..3430012(-) (pilM) [Acinetobacter baumannii strain YU-R612]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTHAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLPDRLANPNRVNVLLVATRTENVETRVEVLEL
ADLNPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRSLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=169504 AXA63_RS16615 WP_002014066.1 3428954..3430012(-) (pilM) [Acinetobacter baumannii strain YU-R612]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCAGTTGCAGAGGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTCATGCTGCAATT
GCTGTTCCGACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGCGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTGCCCGATCGTCTTG
CGAATCCAAATCGTGTAAATGTACTCTTGGTCGCCACAAGAACAGAAAACGTTGAAACACGCGTTGAAGTGCTTGAATTG
GCAGATTTAAATCCTAAATTGGCTGATGTCGAAAGTTACGCGGTTGAGCGCGCTTTTAGCGTGTTTGCTGATAGCTTACC
GATGGGTGCAAATACCATAGGGATTTTAGATATCGGCCATACCATGACGACATTATCTGTCATGCAAAATGGCAAGATTA
TTTATACACGAGAGCAGGTCTTTGGTGGCAAGCAACTTACGCTTGAAATTCAAAGTCGTTATGGCTTGTCTTTAGAAGAA
GCAAGCCGAGCGAAAAAAGATCGCTCTTTACCAGATGATTATGAAATTGAAGTGCTAGACCCATTTCTAGATGCGGTAGT
TCAGCAGGCGGCCCGTTCACTACAATTTTTCTTTTCTTCATCCCAATTTAACGAAATAGACCATATTTTGCTAGCTGGTG
GAAATGCGAATATTCCAGGCCTTGCCAAGCTTTTGCAGCAAAAATTAGGTTACCGTGTCACGATTGCCAACCCGTTTTTA
CAAATGGGCTTTTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCTTCATCTTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: N9LI98

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	100	100	1
comM	Acinetobacter nosocomialis M2	99.148	100	0.991
comM	Acinetobacter baylyi ADP1	81.534	100	0.815
pilM	Legionella pneumophila strain ERS1305867	42.09	100	0.423