Detailed information NTG0167322

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: AL533_RS18955
• Genome accession: NZ_CP014019
• Coordinates: 3952303..3953361 (+)
• Length: 352 a.a.
• NCBI ID: WP_004711654.1
• Uniprot ID: A0AAV3IQ41
• Organism: Acinetobacter nosocomialis strain FDAARGOS_129
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3947303..3958361

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AL533_RS18940 (AL533_18940)	-	3948406..3948738 (+)	333	WP_002051722.1	hypothetical protein	-
AL533_RS18945 (AL533_18945)	-	3948741..3949565 (+)	825	WP_100222400.1	putative RNA methyltransferase	-
AL533_RS18950 (AL533_18950)	ponA	3949583..3952141 (-)	2559	WP_031982123.1	penicillin-binding protein PBP1a	-
AL533_RS18955 (AL533_18955)	comM	3952303..3953361 (+)	1059	WP_004711654.1	pilus assembly protein PilM	Machinery gene
AL533_RS18960 (AL533_18960)	pilN	3953361..3954005 (+)	645	WP_006581060.1	PilN domain-containing protein	Machinery gene
AL533_RS18965 (AL533_18965)	pilO	3954002..3954742 (+)	741	WP_016803752.1	type 4a pilus biogenesis protein PilO	Machinery gene
AL533_RS18970 (AL533_18970)	pilP	3954753..3955280 (+)	528	WP_006582542.1	pilus assembly protein PilP	Machinery gene
AL533_RS18975 (AL533_18975)	pilQ	3955343..3957508 (+)	2166	WP_004884727.1	type IV pilus secretin PilQ family protein	Machinery gene
AL533_RS18980 (AL533_18980)	aroK	3957520..3958089 (+)	570	WP_002051689.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39065.66 Da
• Isoelectric Point: 4.4177

>NTDB_id=167322 AL533_RS18955 WP_004711654.1 3952303..3953361(+) (comM) [Acinetobacter nosocomialis strain FDAARGOS_129]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTNAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLPDRLLNPNRVNVLLVATRTENVETRVEVLEL
ADLNPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRTLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=167322 AL533_RS18955 WP_004711654.1 3952303..3953361(+) (comM) [Acinetobacter nosocomialis strain FDAARGOS_129]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGCGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCTGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCGGTAGCAGAAGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTAATGCTGCAATT
GCTGTTCCAACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGTGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTACATACCGTTCCCGCTGGATGAGGTGAGCCTTGATTTTGAGGTTTTGCCTGATCGCTTGC
TGAATCCAAATCGAGTAAATGTTCTTTTGGTCGCAACAAGAACGGAAAACGTTGAAACACGTGTTGAAGTTCTTGAATTG
GCAGATTTGAATCCTAAACTGGCAGATGTCGAGAGTTATGCAGTCGAACGTGCTTTTAGTGTGTTTGCTGATAGCTTGCC
GATGGGCGCAAATACGATAGGAATTTTAGATATCGGCCATACCATGACAACACTATCGGTCATGCAAAATGGCAAGATTA
TTTATACTCGTGAGCAGGTTTTTGGCGGTAAGCAACTTACGCTTGAAATTCAAAGTCGTTATGGCCTCTCTCTAGAAGAA
GCAAGCCGAGCTAAAAAAGACCGTACTTTGCCAGACGATTATGAAATTGAGGTACTAGATCCATTTCTAGATGCTGTGGT
TCAGCAGGCGGCCCGCTCATTACAATTCTTCTTTTCTTCATCTCAGTTTAACGAAATAGACCATATTTTGCTTGCAGGTG
GCAATGCGAATATTCCAGGTCTTGCCAAGCTTTTGCAGCAAAAATTAGGCTACCGTGTCACTATTGCCAACCCATTTTTA
CAAATGGGTTTTTCTCCTCAAGTCGACGTTCAAAAAATCGAAAATGATGCTTCATCTTTAATGGTGGCATGCGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	100	100	1
pilM	Acinetobacter baumannii D1279779	99.148	100	0.991
comM	Acinetobacter baylyi ADP1	81.25	100	0.813
pilM	Legionella pneumophila strain ERS1305867	42.373	100	0.426