Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | AOX59_RS03370 | Genome accession | NZ_CP013862 |
| Coordinates | 666349..666789 (+) | Length | 146 a.a. |
| NCBI ID | WP_068441837.1 | Uniprot ID | A0A0U4FGD3 |
| Organism | Lentibacillus amyloliquefaciens strain LAM0015 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 661349..671789
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AOX59_RS19105 | sda | 662833..662979 (+) | 147 | WP_082684109.1 | sporulation histidine kinase inhibitor Sda | - |
| AOX59_RS20650 | - | 663136..663216 (+) | 81 | WP_418000779.1 | putative holin-like toxin | - |
| AOX59_RS19500 | - | 663486..663602 (-) | 117 | WP_156418628.1 | FbpB family small basic protein | - |
| AOX59_RS03360 (AOX59_03355) | - | 664243..665526 (+) | 1284 | WP_068441831.1 | RecT family recombinase | - |
| AOX59_RS03365 (AOX59_03360) | - | 665526..666290 (+) | 765 | WP_068441834.1 | hypothetical protein | - |
| AOX59_RS03370 (AOX59_03365) | ssbA | 666349..666789 (+) | 441 | WP_068441837.1 | single-stranded DNA-binding protein | Machinery gene |
| AOX59_RS03375 (AOX59_03370) | - | 666873..667589 (+) | 717 | WP_068441840.1 | RecB family exonuclease | - |
| AOX59_RS03380 (AOX59_03375) | - | 667780..668253 (+) | 474 | WP_068441843.1 | GNAT family N-acetyltransferase | - |
| AOX59_RS03385 (AOX59_03380) | - | 668331..669194 (+) | 864 | WP_068441846.1 | alpha/beta hydrolase | - |
| AOX59_RS03395 (AOX59_03390) | - | 669714..670520 (+) | 807 | WP_068441849.1 | hypothetical protein | - |
| AOX59_RS03400 (AOX59_03395) | - | 670997..671203 (-) | 207 | WP_068441852.1 | alpha/beta-type small acid-soluble spore protein | - |
Sequence
Protein
Download Length: 146 a.a. Molecular weight: 16468.07 Da Isoelectric Point: 6.4568
>NTDB_id=165286 AOX59_RS03370 WP_068441837.1 666349..666789(+) (ssbA) [Lentibacillus amyloliquefaciens strain LAM0015]
MNNVQMIGRMTKDVELKYTQNGNAVATFTLAVNRPFRNHQGNQDADFIRCQIWRKPAENTAQYCGKGSQVGVTGRIQTRS
FEGQDGKTVFMTEVVADNVEFLDTRNQNGQGNQQHGYQPNNQNKQQNNPYQGQGVPVDVNDEDLPF
MNNVQMIGRMTKDVELKYTQNGNAVATFTLAVNRPFRNHQGNQDADFIRCQIWRKPAENTAQYCGKGSQVGVTGRIQTRS
FEGQDGKTVFMTEVVADNVEFLDTRNQNGQGNQQHGYQPNNQNKQQNNPYQGQGVPVDVNDEDLPF
Nucleotide
Download Length: 441 bp
>NTDB_id=165286 AOX59_RS03370 WP_068441837.1 666349..666789(+) (ssbA) [Lentibacillus amyloliquefaciens strain LAM0015]
ATGAACAATGTACAAATGATTGGTCGTATGACAAAAGATGTGGAGCTGAAATACACACAGAATGGCAATGCCGTGGCAAC
CTTTACGTTGGCGGTAAACCGTCCGTTCAGGAATCATCAAGGCAATCAGGATGCGGACTTTATTCGCTGCCAGATATGGC
GCAAACCTGCCGAGAACACAGCACAATACTGCGGGAAAGGTTCTCAGGTTGGTGTCACAGGCCGCATCCAGACGCGTTCC
TTTGAGGGGCAGGATGGCAAGACGGTCTTTATGACGGAAGTGGTAGCCGATAACGTTGAATTTCTTGATACACGTAACCA
GAACGGTCAAGGAAATCAGCAACACGGTTATCAACCAAACAACCAAAACAAGCAGCAAAATAATCCGTATCAGGGCCAGG
GTGTACCGGTCGATGTCAACGATGAAGACCTGCCATTTTAA
ATGAACAATGTACAAATGATTGGTCGTATGACAAAAGATGTGGAGCTGAAATACACACAGAATGGCAATGCCGTGGCAAC
CTTTACGTTGGCGGTAAACCGTCCGTTCAGGAATCATCAAGGCAATCAGGATGCGGACTTTATTCGCTGCCAGATATGGC
GCAAACCTGCCGAGAACACAGCACAATACTGCGGGAAAGGTTCTCAGGTTGGTGTCACAGGCCGCATCCAGACGCGTTCC
TTTGAGGGGCAGGATGGCAAGACGGTCTTTATGACGGAAGTGGTAGCCGATAACGTTGAATTTCTTGATACACGTAACCA
GAACGGTCAAGGAAATCAGCAACACGGTTATCAACCAAACAACCAAAACAAGCAGCAAAATAATCCGTATCAGGGCCAGG
GTGTACCGGTCGATGTCAACGATGAAGACCTGCCATTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
45.614 |
100 |
0.534 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
43.787 |
100 |
0.507 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
58.252 |
70.548 |
0.411 |
| ssb | Neisseria meningitidis MC58 |
32.558 |
100 |
0.384 |
| ssb | Neisseria gonorrhoeae MS11 |
32.558 |
100 |
0.384 |
| ssb | Vibrio cholerae strain A1552 |
30.636 |
100 |
0.363 |