Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   BEN15_RS07125 Genome accession   NZ_CP016877
Coordinates   1343503..1345251 (+) Length   582 a.a.
NCBI ID   WP_065973103.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain KLDS 3.1003     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1338503..1350251
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BEN15_RS07105 (BEN15_07100) glyA 1338894..1340144 (+) 1251 WP_065973100.1 serine hydroxymethyltransferase -
  BEN15_RS07110 (BEN15_07105) - 1340151..1341128 (+) 978 WP_065973101.1 nucleoid-associated protein -
  BEN15_RS07115 (BEN15_07110) - 1341130..1341741 (+) 612 WP_041827001.1 lysozyme family protein -
  BEN15_RS07120 (BEN15_07115) - 1341774..1343513 (+) 1740 WP_065973102.1 ABC transporter ATP-binding protein -
  BEN15_RS07125 (BEN15_07120) rcrQ 1343503..1345251 (+) 1749 WP_065973103.1 ABC transporter ATP-binding protein Regulator
  BEN15_RS07130 (BEN15_07125) - 1345427..1345558 (+) 132 WP_002885174.1 teichoic acid D-Ala incorporation-associated protein DltX -
  BEN15_RS07135 (BEN15_07130) dltA 1345567..1347117 (+) 1551 WP_065973104.1 D-alanine--poly(phosphoribitol) ligase subunit DltA -
  BEN15_RS07140 (BEN15_07135) dltB 1347114..1348361 (+) 1248 WP_014608186.1 D-alanyl-lipoteichoic acid biosynthesis protein DltB -
  BEN15_RS07145 (BEN15_07140) dltC 1348379..1348618 (+) 240 WP_002950439.1 D-alanine--poly(phosphoribitol) ligase subunit DltC -
  BEN15_RS07150 (BEN15_07145) dltD 1348611..1349879 (+) 1269 WP_065973105.1 D-alanyl-lipoteichoic acid biosynthesis protein DltD -

Sequence

Protein


Download         Length: 582 a.a.        Molecular weight: 65883.51 Da        Isoelectric Point: 9.2071

>NTDB_id=165070 BEN15_RS07125 WP_065973103.1 1343503..1345251(+) (rcrQ) [Streptococcus thermophilus strain KLDS 3.1003]
MKARNNKSTLKRLCKDILSQRYLFALATVGTIVQVALTVYFPILLGDAVDAVLKMNAVFLMSRLIWQMLLLILANSAIQW
LNPLIYNRLIYSYSESLRERVMMKIHAIPFSYLDRQGTGDMVSRVTTDSDQLNNGLLMFFNQFFVGLLTIFVIIITMARL
DWFMMLLVLVMTPLSMLVTRFIARKSYQLYRNQTKWRGKQTQLIEESLTQEALVQILNAQDQMVRNFNEVNGKYANYSQG
AIFYSSAVNPATRFFNSLLYALITGVGAYRIMSGGTFTVGQLTTFLNYVTQYTKPFNDISSVLSELQSALACADRLYMIL
DEDEIPETGNAVLDEAEVQGHFQFDHVQFGYLQNKPLIKDLSIDIPAASTVAIVGPTGAGKSTLINLLMRFYDLDKGQIL
LDGRDITYYTRESLRKQIGMVLQETWLKVATIHDNIAYGNPKASREEVVAAAKAANADFFIKQLPLGYDTFLRDAGQSLS
QGQRQLLTIARIFVNVPKILILDEATSSIDTRTELLIQEAFAKLMKGRTSFIIAHRLSTIENADLILVMNNGDIVEHGTH
NQLMRTKGMYYRMQTAQKTQNN

Nucleotide


Download         Length: 1749 bp        

>NTDB_id=165070 BEN15_RS07125 WP_065973103.1 1343503..1345251(+) (rcrQ) [Streptococcus thermophilus strain KLDS 3.1003]
ATGAAGGCTAGAAATAACAAGTCAACGCTTAAACGATTATGTAAAGATATCCTAAGTCAGCGTTACCTCTTTGCCTTAGC
AACTGTTGGGACCATTGTTCAAGTTGCTTTGACTGTTTACTTCCCTATTTTGCTTGGCGATGCAGTAGATGCTGTTCTTA
AGATGAATGCTGTCTTTTTGATGTCACGTTTGATTTGGCAGATGCTTTTGCTTATCTTAGCTAATAGTGCAATCCAGTGG
CTTAACCCTTTGATTTATAATCGATTGATTTATTCTTATAGCGAAAGTTTACGTGAACGAGTCATGATGAAAATTCATGC
TATTCCATTCAGTTATCTTGATCGCCAAGGAACTGGAGACATGGTTAGCCGCGTGACTACAGATAGTGACCAATTGAATA
ATGGTCTCCTTATGTTCTTTAATCAATTTTTCGTTGGACTTTTGACCATCTTTGTCATAATCATTACCATGGCTCGCTTA
GACTGGTTCATGATGCTCTTAGTTCTAGTGATGACACCTTTATCAATGCTTGTGACTCGTTTCATTGCTAGGAAGAGTTA
TCAACTCTATCGCAATCAAACCAAGTGGAGAGGCAAACAGACTCAGCTGATCGAAGAAAGTCTAACTCAGGAAGCTCTGG
TACAAATTCTAAATGCTCAAGACCAGATGGTTCGCAATTTTAATGAGGTTAATGGTAAGTATGCTAACTATTCACAGGGA
GCCATTTTTTACTCGTCAGCGGTTAACCCAGCTACACGTTTTTTTAATAGCTTGCTTTACGCTCTCATTACAGGTGTTGG
TGCCTATCGCATCATGTCGGGAGGCACATTTACAGTGGGACAATTGACTACCTTCCTAAACTATGTCACTCAGTATACCA
AACCTTTTAATGACATTTCATCTGTCCTATCTGAACTTCAAAGTGCTTTAGCCTGTGCTGATCGTCTATATATGATTTTG
GATGAAGATGAAATACCAGAAACGGGAAATGCGGTTTTGGATGAAGCAGAAGTTCAGGGACATTTTCAATTTGATCATGT
TCAATTTGGCTATTTGCAAAATAAACCTCTTATCAAGGATTTGAGTATTGATATTCCTGCTGCGAGTACCGTTGCTATTG
TTGGCCCAACAGGAGCAGGAAAATCTACTTTGATTAATCTTCTCATGCGTTTTTATGACTTGGATAAGGGTCAAATTTTG
CTAGACGGTCGAGATATTACGTATTATACCCGTGAGAGTCTTCGCAAGCAGATTGGGATGGTTCTACAAGAAACTTGGCT
TAAAGTAGCTACTATCCATGATAATATTGCCTATGGCAATCCAAAAGCTAGTCGAGAGGAAGTAGTTGCAGCAGCCAAAG
CAGCTAATGCTGATTTCTTTATTAAACAATTACCTCTAGGCTATGACACTTTCTTGAGAGATGCAGGGCAATCTCTTTCA
CAAGGTCAACGTCAGTTGCTAACTATTGCTCGTATATTTGTCAATGTTCCTAAAATTCTTATTTTGGATGAAGCAACATC
AAGTATTGATACCCGTACGGAGCTCCTTATTCAAGAAGCTTTTGCTAAACTGATGAAAGGTCGGACGAGTTTCATTATTG
CTCATAGATTATCTACCATTGAGAATGCAGACCTTATTTTGGTAATGAATAATGGTGATATCGTTGAACATGGAACACAT
AATCAATTAATGAGGACTAAGGGAATGTACTATCGTATGCAGACAGCCCAAAAAACACAAAATAATTAA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(25-295)

ABC transporter (ABC_tran)

(359-507)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

37.457

100

0.375

Multiple sequence alignment