Detailed information
Bioinformatically predicted
Overview
| Name | comB | Type | Regulator |
| Locus tag | ATM98_RS06750 | Genome accession | NZ_CP013651 |
| Coordinates | 1414711..1416072 (-) | Length | 453 a.a. |
| NCBI ID | WP_061564518.1 | Uniprot ID | - |
| Organism | Streptococcus sp. A12 | ||
| Function | transport of ComC (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1409711..1421072
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ATM98_RS06735 (ATM98_06735) | - | 1410314..1410982 (+) | 669 | WP_061564516.1 | DUF4947 domain-containing protein | - |
| ATM98_RS06740 (ATM98_06740) | - | 1411048..1413843 (-) | 2796 | WP_061564517.1 | YhgE/Pip domain-containing protein | - |
| ATM98_RS06745 (ATM98_06745) | - | 1413980..1414516 (+) | 537 | WP_006595361.1 | TetR/AcrR family transcriptional regulator | - |
| ATM98_RS06750 (ATM98_06750) | comB | 1414711..1416072 (-) | 1362 | WP_061564518.1 | bacteriocin secretion accessory protein | Regulator |
| ATM98_RS06755 (ATM98_06755) | comA | 1416100..1418253 (-) | 2154 | WP_061564519.1 | peptide cleavage/export ABC transporter ComA | Regulator |
| ATM98_RS06760 (ATM98_06760) | rpsD | 1418537..1419148 (-) | 612 | WP_061564520.1 | 30S ribosomal protein S4 | - |
| ATM98_RS06765 (ATM98_06765) | - | 1419740..1420012 (-) | 273 | WP_048715069.1 | Veg family protein | - |
Sequence
Protein
Download Length: 453 a.a. Molecular weight: 50736.22 Da Isoelectric Point: 6.0722
>NTDB_id=163413 ATM98_RS06750 WP_061564518.1 1414711..1416072(-) (comB) [Streptococcus sp. A12]
MMNEKYFESAEFYQKRFHNFASLWVVPCFLLLLFVVGFSVFAKKEVTLSSRGTIEATRVVDQIQSTSNSPIQVNHLKENE
EIKKGEILVEYQEVQEKQQGMNLTQQLDLLKKQEEQLKLLKTSIETGESQFTGTEHFGYDQLFKDYQQQIAILQAQVHQQ
NATIASQNASASSSQAEIGQAIQDQEKRLADYHSLKSALLEGRSLDATHPLYSLYQSYAQQPHGEENAQAQASFISQLDS
QIQQLEASISNYRIQYAGSGSQQAFSTSLDSQIASLKAQQLSKVGQDLLLLSQQIADLDSKLKSQENLLQKTRILAKDEG
VIHLNDETKGASIVAEGTPLAQVYPLIQKEKEVKIVTYIPSKDIATIHVGDRIRFSTQGSKQKPITLEARISSIASSATR
TEQGNFFKIEGVLRLKDQEAKLLRYGLEGKCVLITGEKSYFSFFVDQFLGAGN
MMNEKYFESAEFYQKRFHNFASLWVVPCFLLLLFVVGFSVFAKKEVTLSSRGTIEATRVVDQIQSTSNSPIQVNHLKENE
EIKKGEILVEYQEVQEKQQGMNLTQQLDLLKKQEEQLKLLKTSIETGESQFTGTEHFGYDQLFKDYQQQIAILQAQVHQQ
NATIASQNASASSSQAEIGQAIQDQEKRLADYHSLKSALLEGRSLDATHPLYSLYQSYAQQPHGEENAQAQASFISQLDS
QIQQLEASISNYRIQYAGSGSQQAFSTSLDSQIASLKAQQLSKVGQDLLLLSQQIADLDSKLKSQENLLQKTRILAKDEG
VIHLNDETKGASIVAEGTPLAQVYPLIQKEKEVKIVTYIPSKDIATIHVGDRIRFSTQGSKQKPITLEARISSIASSATR
TEQGNFFKIEGVLRLKDQEAKLLRYGLEGKCVLITGEKSYFSFFVDQFLGAGN
Nucleotide
Download Length: 1362 bp
>NTDB_id=163413 ATM98_RS06750 WP_061564518.1 1414711..1416072(-) (comB) [Streptococcus sp. A12]
ATGATGAACGAAAAATATTTTGAAAGTGCAGAATTCTATCAGAAACGTTTCCACAATTTTGCTAGTTTATGGGTAGTCCC
TTGTTTTCTTTTACTACTGTTTGTTGTCGGTTTCTCTGTCTTTGCCAAGAAGGAAGTGACCTTGTCTAGTCGTGGAACGA
TTGAAGCTACGCGCGTGGTGGACCAAATCCAGTCAACGAGTAATTCTCCCATCCAAGTCAACCATTTGAAGGAAAATGAA
GAGATTAAGAAGGGAGAAATCTTGGTAGAATACCAAGAGGTTCAGGAAAAACAGCAAGGAATGAACTTAACGCAACAGCT
CGACCTCTTAAAGAAACAGGAGGAACAATTAAAATTGTTGAAAACGAGCATTGAGACAGGGGAGAGCCAATTTACAGGAA
CTGAGCATTTTGGGTATGACCAGCTGTTTAAGGATTATCAGCAACAAATAGCGATTCTCCAAGCGCAAGTCCATCAACAG
AATGCAACCATTGCCTCTCAAAATGCCAGTGCAAGTTCCAGTCAAGCGGAAATTGGCCAAGCTATCCAAGACCAAGAGAA
GCGATTAGCTGATTACCATAGTCTAAAATCAGCTCTACTAGAAGGAAGAAGTCTGGATGCGACTCATCCACTTTATTCTC
TCTACCAGAGTTACGCTCAGCAACCACATGGAGAAGAAAACGCTCAAGCACAAGCTTCTTTTATCAGTCAGCTAGATAGT
CAAATCCAGCAGTTAGAGGCGAGTATTTCTAATTATCGCATCCAATATGCGGGATCCGGAAGCCAACAAGCTTTTTCGAC
CAGCTTAGATAGTCAAATAGCCTCTCTGAAAGCTCAACAGCTGAGTAAAGTTGGACAAGATTTGCTGCTTCTTTCTCAGC
AAATTGCAGATCTAGACAGTAAGTTAAAATCACAAGAAAATCTTCTTCAGAAGACTCGGATTCTAGCCAAGGATGAAGGG
GTGATTCATTTGAATGATGAAACAAAAGGAGCGAGTATTGTAGCGGAAGGCACTCCTTTGGCTCAAGTTTATCCACTCAT
TCAGAAAGAAAAAGAAGTCAAGATTGTTACCTATATTCCTTCAAAAGATATAGCTACGATTCATGTAGGCGATCGGATTC
GCTTTAGCACACAGGGAAGTAAACAAAAACCAATTACGCTAGAGGCCCGTATTAGCTCAATTGCTTCGAGTGCCACTCGG
ACAGAGCAGGGGAACTTTTTCAAAATAGAGGGAGTTCTTCGTCTCAAGGATCAGGAGGCCAAACTCCTACGATACGGTTT
GGAAGGGAAGTGTGTCCTGATCACAGGAGAGAAATCTTACTTCAGTTTCTTTGTGGATCAATTTTTAGGAGCAGGGAACT
AA
ATGATGAACGAAAAATATTTTGAAAGTGCAGAATTCTATCAGAAACGTTTCCACAATTTTGCTAGTTTATGGGTAGTCCC
TTGTTTTCTTTTACTACTGTTTGTTGTCGGTTTCTCTGTCTTTGCCAAGAAGGAAGTGACCTTGTCTAGTCGTGGAACGA
TTGAAGCTACGCGCGTGGTGGACCAAATCCAGTCAACGAGTAATTCTCCCATCCAAGTCAACCATTTGAAGGAAAATGAA
GAGATTAAGAAGGGAGAAATCTTGGTAGAATACCAAGAGGTTCAGGAAAAACAGCAAGGAATGAACTTAACGCAACAGCT
CGACCTCTTAAAGAAACAGGAGGAACAATTAAAATTGTTGAAAACGAGCATTGAGACAGGGGAGAGCCAATTTACAGGAA
CTGAGCATTTTGGGTATGACCAGCTGTTTAAGGATTATCAGCAACAAATAGCGATTCTCCAAGCGCAAGTCCATCAACAG
AATGCAACCATTGCCTCTCAAAATGCCAGTGCAAGTTCCAGTCAAGCGGAAATTGGCCAAGCTATCCAAGACCAAGAGAA
GCGATTAGCTGATTACCATAGTCTAAAATCAGCTCTACTAGAAGGAAGAAGTCTGGATGCGACTCATCCACTTTATTCTC
TCTACCAGAGTTACGCTCAGCAACCACATGGAGAAGAAAACGCTCAAGCACAAGCTTCTTTTATCAGTCAGCTAGATAGT
CAAATCCAGCAGTTAGAGGCGAGTATTTCTAATTATCGCATCCAATATGCGGGATCCGGAAGCCAACAAGCTTTTTCGAC
CAGCTTAGATAGTCAAATAGCCTCTCTGAAAGCTCAACAGCTGAGTAAAGTTGGACAAGATTTGCTGCTTCTTTCTCAGC
AAATTGCAGATCTAGACAGTAAGTTAAAATCACAAGAAAATCTTCTTCAGAAGACTCGGATTCTAGCCAAGGATGAAGGG
GTGATTCATTTGAATGATGAAACAAAAGGAGCGAGTATTGTAGCGGAAGGCACTCCTTTGGCTCAAGTTTATCCACTCAT
TCAGAAAGAAAAAGAAGTCAAGATTGTTACCTATATTCCTTCAAAAGATATAGCTACGATTCATGTAGGCGATCGGATTC
GCTTTAGCACACAGGGAAGTAAACAAAAACCAATTACGCTAGAGGCCCGTATTAGCTCAATTGCTTCGAGTGCCACTCGG
ACAGAGCAGGGGAACTTTTTCAAAATAGAGGGAGTTCTTCGTCTCAAGGATCAGGAGGCCAAACTCCTACGATACGGTTT
GGAAGGGAAGTGTGTCCTGATCACAGGAGAGAAATCTTACTTCAGTTTCTTTGTGGATCAATTTTTAGGAGCAGGGAACT
AA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comB | Streptococcus gordonii str. Challis substr. CH1 |
53.761 |
99.779 |
0.536 |
| comB | Streptococcus mitis SK321 |
49.777 |
98.896 |
0.492 |
| comB | Streptococcus mitis NCTC 12261 |
49.777 |
98.896 |
0.492 |
| comB | Streptococcus pneumoniae D39 |
49.554 |
98.896 |
0.49 |
| comB | Streptococcus pneumoniae Rx1 |
49.554 |
98.896 |
0.49 |
| comB | Streptococcus pneumoniae R6 |
49.554 |
98.896 |
0.49 |
| comB | Streptococcus pneumoniae TIGR4 |
48.884 |
98.896 |
0.483 |