Detailed information NTG0163397

Bioinformatically predicted

Overview

• Name: dprA/cilB/dalA
• Type: Machinery gene
• Locus tag: ATM98_RS02385
• Genome accession: NZ_CP013651
• Coordinates: 465637..466479 (+)
• Length: 280 a.a.
• NCBI ID: WP_061563957.1
• Uniprot ID: -
• Organism: Streptococcus sp. A12
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 460637..471479

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ATM98_RS02360 (ATM98_02360)	dapA	461543..462478 (+)	936	WP_048715961.1	4-hydroxy-tetrahydrodipicolinate synthase	-
ATM98_RS02365 (ATM98_02365)	-	462550..462888 (+)	339	WP_006597242.1	ATP cone domain-containing protein	-
ATM98_RS02370 (ATM98_02370)	ylqF	463014..463865 (+)	852	WP_061563954.1	ribosome biogenesis GTPase YlqF	-
ATM98_RS02375 (ATM98_02375)	-	463852..464622 (+)	771	WP_061563955.1	ribonuclease HII	-
ATM98_RS02380 (ATM98_02380)	-	464634..465560 (+)	927	WP_061563956.1	ROK family protein	-
ATM98_RS02385 (ATM98_02385)	dprA/cilB/dalA	465637..466479 (+)	843	WP_061563957.1	DNA-processing protein DprA	Machinery gene
ATM98_RS02390 (ATM98_02390)	topA	466572..468659 (+)	2088	WP_061563958.1	type I DNA topoisomerase	-
ATM98_RS02395 (ATM98_02395)	-	468767..469444 (+)	678	WP_061563959.1	SatD family protein	-
ATM98_RS02400 (ATM98_02400)	-	469428..470132 (+)	705	WP_061563960.1	DUF3307 domain-containing protein	-

Sequence

Protein

• Length: 280 a.a.
• Molecular weight: 31436.10 Da
• Isoelectric Point: 6.6067

>NTDB_id=163397 ATM98_RS02385 WP_061563957.1 465637..466479(+) (dprA/cilB/dalA) [Streptococcus sp. A12]
MNKYELYKLKVAGLSNLQVFNIVNYWEMNGEWPSLELMAKIAGCRNQTLFMERYIRIDDKVLREEFKEFDSISIMDPEYP
EELLWMHNPPVLLFYSGNIDLLKQPKIAVVGSRSCSRNGIQSVEKIINELNNELIVVSGLAKGIDAAAHYAAIRNGGKTI
GVIGTGLDIFYPRSNKQLQKYMSGNHLVLTEYGSGQGPQKHHFPERNRIIAGLSRAVIVAEARMRSGSLITCERAMEEGR
DVFAIPGSILDGRSDGCHHLIQEGAKLVTSGKDVLDEFEF

Nucleotide

• Length: 843 bp

>NTDB_id=163397 ATM98_RS02385 WP_061563957.1 465637..466479(+) (dprA/cilB/dalA) [Streptococcus sp. A12]
ATGAACAAATATGAACTTTATAAATTAAAGGTTGCTGGCCTGTCAAATTTACAGGTTTTTAACATTGTCAATTACTGGGA
AATGAATGGGGAGTGGCCCTCTTTAGAATTAATGGCAAAAATTGCAGGTTGTCGCAATCAAACACTATTTATGGAACGGT
ATATCCGGATTGATGACAAGGTCTTGAGAGAAGAGTTCAAGGAGTTTGATTCGATTTCTATTATGGATCCGGAATATCCT
GAAGAACTTCTCTGGATGCATAACCCACCTGTTTTGTTGTTTTACTCAGGCAATATTGATCTTCTTAAACAGCCAAAGAT
TGCGGTCGTAGGAAGTCGATCCTGTAGTCGTAACGGGATACAATCCGTCGAGAAAATCATTAACGAGTTAAATAATGAAT
TGATTGTGGTGAGCGGATTAGCCAAGGGAATTGATGCTGCAGCCCATTATGCTGCTATTCGAAATGGAGGAAAGACAATT
GGAGTGATTGGGACTGGCTTAGATATCTTCTATCCTAGATCCAATAAACAATTGCAGAAGTACATGAGTGGGAACCATTT
AGTGTTAACAGAATACGGTTCAGGCCAAGGTCCGCAAAAACATCATTTTCCAGAACGTAATCGGATTATTGCTGGGCTTT
CTAGAGCAGTGATTGTGGCGGAAGCGCGGATGCGGTCTGGAAGTCTGATCACCTGTGAGCGTGCAATGGAAGAAGGGCGA
GATGTCTTTGCTATTCCTGGGTCGATCTTGGATGGACGTTCAGATGGCTGTCACCACCTCATTCAAGAAGGTGCAAAGCT
GGTCACCAGTGGAAAAGATGTCCTAGATGAGTTTGAATTTTAA

Domains

Predicted by InterproScan.

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (1-62)

• DNA recombination-mediator protein A (DNA_processg_A) (69-269)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA/cilB/dalA	Streptococcus mitis SK321	67.857	100	0.679
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	67.143	100	0.671
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	66.786	100	0.668
dprA/cilB/dalA	Streptococcus pneumoniae D39	66.786	100	0.668
dprA/cilB/dalA	Streptococcus pneumoniae R6	66.786	100	0.668
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	66.786	100	0.668
dprA	Streptococcus mutans UA159	58.571	100	0.586
dprA	Lactococcus lactis subsp. cremoris KW2	54.643	100	0.546
dprA	Legionella pneumophila strain ERS1305867	39.474	95	0.375
dprA	Bacillus subtilis subsp. subtilis str. 168	37.818	98.214	0.371