Detailed information
Bioinformatically predicted
Overview
| Name | comR/comR1 | Type | Regulator |
| Locus tag | APQ13_RS06015 | Genome accession | NZ_CP013237 |
| Coordinates | 1259831..1260733 (+) | Length | 300 a.a. |
| NCBI ID | WP_061046386.1 | Uniprot ID | - |
| Organism | Streptococcus mutans strain NG8 isolate Dental Plaque | ||
| Function | repress natural transformation (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1254831..1265733
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| APQ13_RS05990 (APQ13_05980) | rimI | 1255660..1256094 (-) | 435 | WP_002351170.1 | ribosomal protein S18-alanine N-acetyltransferase | - |
| APQ13_RS05995 (APQ13_05985) | tsaB | 1256094..1256780 (-) | 687 | WP_002272705.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB | - |
| APQ13_RS06000 (APQ13_05990) | - | 1256791..1257249 (-) | 459 | WP_002269503.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| APQ13_RS06005 (APQ13_05995) | - | 1257423..1258469 (+) | 1047 | WP_002273658.1 | SDR family oxidoreductase | - |
| APQ13_RS06010 (APQ13_06000) | - | 1258490..1259458 (+) | 969 | WP_002289709.1 | aldo/keto reductase | - |
| APQ13_RS06015 (APQ13_06005) | comR/comR1 | 1259831..1260733 (+) | 903 | WP_061046386.1 | helix-turn-helix domain-containing protein | Regulator |
| APQ13_RS10270 | - | 1261449..1261595 (-) | 147 | WP_002265758.1 | hypothetical protein | - |
| APQ13_RS10390 (APQ13_06010) | - | 1261595..1261780 (-) | 186 | WP_002265759.1 | hypothetical protein | - |
| APQ13_RS10275 | - | 1261791..1261931 (-) | 141 | WP_002265760.1 | hypothetical protein | - |
| APQ13_RS10280 | - | 1261980..1262123 (-) | 144 | WP_002265761.1 | hypothetical protein | - |
| APQ13_RS06025 (APQ13_06015) | - | 1262328..1263566 (-) | 1239 | WP_002289707.1 | aminotransferase class III-fold pyridoxal phosphate-dependent enzyme | - |
| APQ13_RS06030 (APQ13_06020) | - | 1263582..1264490 (-) | 909 | WP_002274712.1 | hypothetical protein | - |
| APQ13_RS06035 (APQ13_06025) | - | 1264501..1265211 (-) | 711 | WP_002265765.1 | SDR family NAD(P)-dependent oxidoreductase | - |
Sequence
Protein
Download Length: 300 a.a. Molecular weight: 35007.28 Da Isoelectric Point: 4.5017
>NTDB_id=160986 APQ13_RS06015 WP_061046386.1 1259831..1260733(+) (comR/comR1) [Streptococcus mutans strain NG8 isolate Dental Plaque]
MTIKEDLGRRIKAERNRKQLTQSLLCGDETKLTIRQLQRIEGGQSLPTLEKLEFIADRLGTKIADLLEGSDIQLPDDYWE
LKGQIVKFPTYADKERLQQKQDLIEEIYDKYFDILPEDELLFLDLSENILDSFHEKDIPNIEEIYDDAFEQVLKKETFAF
NDYLYMSYFLQKCGKTADYEQTTFKLLEQKLLKQELTVDELYNIELLIAVMEASGVYALHNDYQNLLPLMKKAQRIIDKA
QLHTYKPPLLELEAKYYVKVVKDKKKAKELYQQALVMGEVLGDPVIIADVKMEMANDGID
MTIKEDLGRRIKAERNRKQLTQSLLCGDETKLTIRQLQRIEGGQSLPTLEKLEFIADRLGTKIADLLEGSDIQLPDDYWE
LKGQIVKFPTYADKERLQQKQDLIEEIYDKYFDILPEDELLFLDLSENILDSFHEKDIPNIEEIYDDAFEQVLKKETFAF
NDYLYMSYFLQKCGKTADYEQTTFKLLEQKLLKQELTVDELYNIELLIAVMEASGVYALHNDYQNLLPLMKKAQRIIDKA
QLHTYKPPLLELEAKYYVKVVKDKKKAKELYQQALVMGEVLGDPVIIADVKMEMANDGID
Nucleotide
Download Length: 903 bp
>NTDB_id=160986 APQ13_RS06015 WP_061046386.1 1259831..1260733(+) (comR/comR1) [Streptococcus mutans strain NG8 isolate Dental Plaque]
ATGACAATAAAAGAAGATTTAGGACGGCGGATTAAAGCAGAAAGGAATCGCAAGCAACTCACACAAAGCCTTTTGTGCGG
AGATGAAACAAAACTGACCATTCGACAGCTTCAGCGGATTGAGGGCGGGCAGTCTTTGCCGACCCTAGAAAAATTAGAAT
TCATTGCTGATCGCTTAGGAACTAAAATAGCCGACCTGCTGGAAGGCAGCGATATCCAGCTGCCAGATGATTACTGGGAG
CTAAAGGGGCAGATTGTTAAATTTCCCACCTATGCTGATAAGGAAAGACTTCAGCAAAAACAGGATCTGATCGAAGAAAT
CTATGACAAATACTTTGATATCCTGCCTGAGGATGAACTGCTCTTTTTAGATTTGTCAGAGAATATCCTAGACAGTTTTC
ATGAAAAAGACATTCCTAACATTGAGGAGATTTACGACGATGCCTTTGAGCAAGTCCTCAAAAAGGAGACCTTTGCCTTT
AATGACTATCTTTACATGAGCTATTTTTTACAAAAGTGCGGAAAAACAGCGGACTATGAGCAGACAACTTTCAAGTTGCT
TGAGCAAAAATTGCTCAAGCAAGAGCTAACAGTAGACGAACTTTATAATATTGAACTTTTGATTGCTGTTATGGAGGCAT
CAGGTGTTTATGCCCTTCATAATGATTACCAGAATCTTCTTCCTTTAATGAAGAAGGCTCAGCGAATTATTGATAAGGCT
CAGCTTCACACCTATAAACCGCCACTTTTAGAACTTGAAGCCAAGTACTATGTCAAGGTTGTCAAGGATAAGAAAAAAGC
TAAGGAACTCTATCAGCAAGCCTTGGTGATGGGCGAAGTTCTAGGTGATCCTGTTATAATTGCAGATGTTAAGATGGAGA
TGGCAAATGATGGGATAGACTAG
ATGACAATAAAAGAAGATTTAGGACGGCGGATTAAAGCAGAAAGGAATCGCAAGCAACTCACACAAAGCCTTTTGTGCGG
AGATGAAACAAAACTGACCATTCGACAGCTTCAGCGGATTGAGGGCGGGCAGTCTTTGCCGACCCTAGAAAAATTAGAAT
TCATTGCTGATCGCTTAGGAACTAAAATAGCCGACCTGCTGGAAGGCAGCGATATCCAGCTGCCAGATGATTACTGGGAG
CTAAAGGGGCAGATTGTTAAATTTCCCACCTATGCTGATAAGGAAAGACTTCAGCAAAAACAGGATCTGATCGAAGAAAT
CTATGACAAATACTTTGATATCCTGCCTGAGGATGAACTGCTCTTTTTAGATTTGTCAGAGAATATCCTAGACAGTTTTC
ATGAAAAAGACATTCCTAACATTGAGGAGATTTACGACGATGCCTTTGAGCAAGTCCTCAAAAAGGAGACCTTTGCCTTT
AATGACTATCTTTACATGAGCTATTTTTTACAAAAGTGCGGAAAAACAGCGGACTATGAGCAGACAACTTTCAAGTTGCT
TGAGCAAAAATTGCTCAAGCAAGAGCTAACAGTAGACGAACTTTATAATATTGAACTTTTGATTGCTGTTATGGAGGCAT
CAGGTGTTTATGCCCTTCATAATGATTACCAGAATCTTCTTCCTTTAATGAAGAAGGCTCAGCGAATTATTGATAAGGCT
CAGCTTCACACCTATAAACCGCCACTTTTAGAACTTGAAGCCAAGTACTATGTCAAGGTTGTCAAGGATAAGAAAAAAGC
TAAGGAACTCTATCAGCAAGCCTTGGTGATGGGCGAAGTTCTAGGTGATCCTGTTATAATTGCAGATGTTAAGATGGAGA
TGGCAAATGATGGGATAGACTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comR/comR1 | Streptococcus sobrinus strain NIDR 6715-7 |
75.333 |
100 |
0.753 |
| comR/comR2 | Streptococcus sobrinus strain NIDR 6715-7 |
69.333 |
100 |
0.693 |
| comR | Streptococcus salivarius strain HSISS4 |
42.14 |
99.667 |
0.42 |
| comR | Streptococcus thermophilus LMD-9 |
41.806 |
99.667 |
0.417 |
| comR | Streptococcus thermophilus LMG 18311 |
41.806 |
99.667 |
0.417 |
| comR | Streptococcus salivarius SK126 |
41.137 |
99.667 |
0.41 |