Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   HSISS4_RS09745 Genome accession   NZ_CP013216
Coordinates   2098786..2100021 (+) Length   411 a.a.
NCBI ID   WP_013991347.1    Uniprot ID   A0AB37CMH1
Organism   Streptococcus salivarius strain HSISS4     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2093786..2105021
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HSISS4_RS09715 (HSISS4_01899) - 2094258..2096852 (+) 2595 WP_021144766.1 YfhO family protein -
  HSISS4_RS09735 (HSISS4_01900) - 2097402..2098085 (-) 684 WP_059749256.1 YoaK family protein -
  HSISS4_RS09740 (HSISS4_01901) rlmH 2098101..2098580 (-) 480 WP_021144768.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  HSISS4_RS09745 (HSISS4_01902) htrA 2098786..2100021 (+) 1236 WP_013991347.1 S1C family serine protease Regulator
  HSISS4_RS09750 (HSISS4_01903) spo0J 2100087..2100854 (+) 768 WP_014635206.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 411 a.a.        Molecular weight: 42915.09 Da        Isoelectric Point: 4.6266

>NTDB_id=160732 HSISS4_RS09745 WP_013991347.1 2098786..2100021(+) (htrA) [Streptococcus salivarius strain HSISS4]
MKKFNWKKIVAPIAMLVIGLLGGLLGAFILLTAAGVSFTNSTDTGVKTAKTVYNNTTDTTKAVKKVQNAVVSVINYQEGS
SSDSLNELYGRIFGGDDSSDSSQDKSKDSDGLQVAGEGSGVIYKKDGKEAYIVTNNHVVDGAKKLEIMLSDGSKITGELV
GKDTYSDLAVVKVSSDKIKTVAEFADSNSLTVGEKAIAIGSPLGTEYANSVTEGIVSSLSRTVTMQNDNGETVSTNAIQT
DAAINPGNSGGALVNIEGQVIGINSSKISSTSAVAGSAVEGMGFAIPSNDVVEIINQLEKDGKVTRPALGISMADLNSLS
SSATSKLDLPDDVKAGVVVGSVQKGMPADGKLQENDVITEIDGKEISSKTDIQTNLYSHSIGDTIKVTFYRGKEKKTEEL
KLTKSTEDLSD

Nucleotide


Download         Length: 1236 bp        

>NTDB_id=160732 HSISS4_RS09745 WP_013991347.1 2098786..2100021(+) (htrA) [Streptococcus salivarius strain HSISS4]
GTGAAAAAATTTAACTGGAAAAAAATAGTAGCGCCAATTGCAATGCTTGTTATTGGCTTACTAGGTGGTTTACTAGGTGC
CTTTATCCTACTAACAGCAGCAGGGGTATCTTTTACCAATTCAACAGATACAGGTGTTAAAACAGCTAAGACCGTATACA
ATAATACAACAGATACAACTAAAGCTGTTAAGAAAGTACAAAATGCCGTTGTTTCTGTCATCAATTACCAAGAAGGGTCA
TCATCAGATTCTCTAAATGAACTTTATGGCCGTATCTTTGGTGGAGATGATAGTTCTGATTCTAGTCAAGACAAATCAAA
AGATTCTGATGGGTTGCAAGTCGCTGGTGAAGGTTCTGGAGTCATCTATAAAAAAGATGGGAAAGAGGCCTACATCGTAA
CCAACAACCACGTTGTCGATGGCGCTAAAAAACTTGAAATCATGCTTTCAGATGGATCAAAAATTACTGGTGAACTTGTT
GGTAAAGATACTTACTCTGACCTAGCAGTTGTCAAAGTTTCTTCAGATAAAATTAAAACCGTAGCGGAATTTGCAGACTC
AAACTCTCTCACAGTCGGCGAGAAGGCAATTGCTATCGGTAGCCCACTTGGTACCGAATATGCCAACTCAGTAACAGAGG
GTATCGTTTCTAGCCTTAGCCGTACTGTAACTATGCAAAACGACAATGGTGAAACTGTTTCAACAAATGCTATCCAAACA
GATGCTGCCATTAACCCTGGTAACTCAGGTGGTGCCTTAGTCAATATCGAAGGACAAGTTATCGGTATTAACTCAAGTAA
AATTTCATCAACGTCAGCAGTCGCTGGTAGCGCCGTTGAAGGTATGGGATTTGCCATTCCATCAAACGATGTTGTCGAAA
TCATCAATCAATTGGAAAAAGACGGTAAAGTTACACGACCAGCCCTAGGAATCTCAATGGCCGATCTTAACAGCCTTTCT
AGCAGTGCAACTTCTAAATTAGATTTACCAGATGATGTGAAAGCTGGAGTTGTAGTCGGCAGCGTTCAAAAAGGTATGCC
AGCTGACGGTAAACTTCAAGAAAATGATGTTATCACTGAAATTGACGGTAAGGAAATCAGCTCAAAAACTGATATTCAAA
CCAATCTTTACAGCCATAGTATTGGAGATACAATCAAGGTAACCTTCTATCGTGGTAAAGAGAAGAAAACTGAAGAACTT
AAATTAACAAAATCTACAGAAGACTTGTCTGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

61.787

98.054

0.606

  htrA Streptococcus gordonii str. Challis substr. CH1

57.389

98.783

0.567

  htrA Streptococcus pneumoniae Rx1

54.279

99.513

0.54

  htrA Streptococcus pneumoniae R6

54.279

99.513

0.54

  htrA Streptococcus pneumoniae TIGR4

54.279

99.513

0.54

  htrA Streptococcus pneumoniae D39

54.279

99.513

0.54

  htrA Streptococcus mitis NCTC 12261

54.279

99.513

0.54


Multiple sequence alignment