Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   HSISS4_RS09750 Genome accession   NZ_CP013216
Coordinates   2100087..2100854 (+) Length   255 a.a.
NCBI ID   WP_014635206.1    Uniprot ID   A0A1F2H938
Organism   Streptococcus salivarius strain HSISS4     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2095087..2105854
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HSISS4_RS09735 (HSISS4_01900) - 2097402..2098085 (-) 684 WP_059749256.1 YoaK family protein -
  HSISS4_RS09740 (HSISS4_01901) rlmH 2098101..2098580 (-) 480 WP_021144768.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  HSISS4_RS09745 (HSISS4_01902) htrA 2098786..2100021 (+) 1236 WP_013991347.1 S1C family serine protease Regulator
  HSISS4_RS09750 (HSISS4_01903) spo0J 2100087..2100854 (+) 768 WP_014635206.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29363.81 Da        Isoelectric Point: 9.4081

>NTDB_id=160733 HSISS4_RS09750 WP_014635206.1 2100087..2100854(+) (spo0J) [Streptococcus salivarius strain HSISS4]
MQEQLKALPISDIYPNPFQPRIEFSDEELAELSQSIAENGLIQPIIVRKSDIIGYELIAGERRLRACKRLGMTEIPAVVK
EVTDQESRKQAIIENLQRSNLNPIEEAKAYRSLINELAYSHEELAKAMGKSRPYISNALRLLQLPQEIQTSIENGKLSQG
HARALLAVEDTKKQLTIYHQVLTEKWSVRTLEKRLQELPKKQKSKKDIHIKDKEKELEKSLGLPVTLRYHKNHSGTIQIH
FSTEEDFNRIINKLI

Nucleotide


Download         Length: 768 bp        

>NTDB_id=160733 HSISS4_RS09750 WP_014635206.1 2100087..2100854(+) (spo0J) [Streptococcus salivarius strain HSISS4]
ATGCAAGAACAACTCAAAGCTTTACCTATTAGTGACATCTATCCCAATCCTTTTCAACCTCGTATAGAGTTCTCTGATGA
AGAATTAGCGGAGCTAAGCCAATCGATTGCAGAAAATGGACTAATACAGCCAATCATTGTCCGAAAATCGGATATTATTG
GTTATGAACTAATTGCTGGGGAAAGACGTTTACGTGCCTGTAAACGTCTAGGAATGACAGAAATCCCTGCAGTTGTAAAG
GAAGTTACAGATCAAGAGAGTCGTAAACAAGCTATTATTGAAAATTTACAACGATCGAATCTCAATCCCATTGAAGAAGC
AAAGGCCTATCGTAGTTTAATTAATGAGCTAGCTTATAGTCACGAGGAACTGGCGAAAGCTATGGGGAAATCCAGACCTT
ATATCAGTAACGCTCTCAGACTCCTCCAACTTCCCCAAGAGATACAGACGAGTATCGAAAATGGCAAACTGAGTCAAGGA
CATGCTAGAGCACTTTTAGCTGTTGAGGATACAAAAAAGCAATTAACTATCTATCATCAGGTCCTTACTGAAAAATGGTC
AGTTCGTACCCTGGAAAAAAGACTTCAAGAACTTCCAAAAAAACAAAAATCAAAAAAAGATATTCATATAAAAGATAAAG
AAAAAGAACTGGAAAAATCACTTGGTCTCCCCGTTACTCTTCGTTATCACAAAAATCACTCTGGAACTATTCAGATCCAC
TTTTCGACGGAAGAAGATTTTAACAGAATTATCAACAAGCTTATTTGA

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(146-196)

ParB/Sulfiredoxin domain (ParB_N)

(8-95)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1F2H938

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

57.647

100

0.576

Multiple sequence alignment