Detailed information
Bioinformatically predicted
Overview
| Name | comE1/comEA | Type | Machinery gene |
| Locus tag | ACT74_RS04300 | Genome accession | NZ_CP012958 |
| Coordinates | 908580..908909 (+) | Length | 109 a.a. |
| NCBI ID | WP_005548420.1 | Uniprot ID | - |
| Organism | Aggregatibacter actinomycetemcomitans strain VT1169 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 903580..913909
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACT74_RS04280 (ACT74_04275) | thrC | 904002..905276 (+) | 1275 | WP_005568426.1 | threonine synthase | - |
| ACT74_RS04285 (ACT74_04280) | - | 905335..906054 (+) | 720 | WP_025298444.1 | 4'-phosphopantetheinyl transferase family protein | - |
| ACT74_RS04290 (ACT74_04285) | hflK | 906150..907403 (+) | 1254 | WP_005589874.1 | FtsH protease activity modulator HflK | - |
| ACT74_RS04295 (ACT74_04290) | hflC | 907403..908290 (+) | 888 | WP_005548417.1 | protease modulator HflC | - |
| ACT74_RS04300 (ACT74_04295) | comE1/comEA | 908580..908909 (+) | 330 | WP_005548420.1 | ComEA family DNA-binding protein | Machinery gene |
| ACT74_RS04305 (ACT74_04300) | - | 909022..909615 (+) | 594 | WP_005571888.1 | XTP/dITP diphosphatase | - |
| ACT74_RS04310 (ACT74_04305) | - | 909654..909977 (+) | 324 | WP_005589878.1 | YbjQ family protein | - |
| ACT74_RS04315 (ACT74_04310) | hemW | 909977..911146 (+) | 1170 | WP_014167851.1 | radical SAM family heme chaperone HemW | - |
| ACT74_RS04320 (ACT74_04315) | rpiA | 911245..911901 (+) | 657 | WP_005539288.1 | ribose-5-phosphate isomerase RpiA | - |
| ACT74_RS04325 (ACT74_04320) | serA | 911920..913152 (+) | 1233 | WP_005568413.1 | phosphoglycerate dehydrogenase | - |
Sequence
Protein
Download Length: 109 a.a. Molecular weight: 11341.10 Da Isoelectric Point: 9.6912
>NTDB_id=158574 ACT74_RS04300 WP_005548420.1 908580..908909(+) (comE1/comEA) [Aggregatibacter actinomycetemcomitans strain VT1169]
MKAMKHLLASLFVLGSVFAGSAVAAEKAAEPAVQTEQPAATAAVGEKVNINTASAAEIQKALVGIGAKKAEAVVQYREKH
GNFSAVEQLLEVQGIGKATLEKNRDRIAL
MKAMKHLLASLFVLGSVFAGSAVAAEKAAEPAVQTEQPAATAAVGEKVNINTASAAEIQKALVGIGAKKAEAVVQYREKH
GNFSAVEQLLEVQGIGKATLEKNRDRIAL
Nucleotide
Download Length: 330 bp
>NTDB_id=158574 ACT74_RS04300 WP_005548420.1 908580..908909(+) (comE1/comEA) [Aggregatibacter actinomycetemcomitans strain VT1169]
ATGAAAGCAATGAAACATCTTTTGGCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAA
AGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCGGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCA
GTGCTGCGGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACAC
GGTAATTTCAGCGCCGTGGAGCAGTTGCTGGAAGTGCAGGGCATCGGCAAAGCGACCTTAGAAAAAAATCGCGACCGTAT
CGCCTTATAA
ATGAAAGCAATGAAACATCTTTTGGCTTCGCTGTTCGTGTTAGGTTCGGTGTTTGCGGGTTCTGCCGTGGCGGCGGAAAA
AGCGGCTGAACCGGCGGTACAAACGGAGCAGCCGGCGGCAACGGCAGCGGTCGGTGAGAAAGTGAATATTAACACCGCCA
GTGCTGCGGAAATTCAAAAAGCCCTTGTAGGCATCGGTGCGAAAAAAGCGGAAGCGGTGGTGCAGTATCGTGAAAAACAC
GGTAATTTCAGCGCCGTGGAGCAGTTGCTGGAAGTGCAGGGCATCGGCAAAGCGACCTTAGAAAAAAATCGCGACCGTAT
CGCCTTATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comE1/comEA | Haemophilus influenzae Rd KW20 |
60.909 |
100 |
0.615 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
53.509 |
100 |
0.56 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
44.34 |
97.248 |
0.431 |
| comEA | Acinetobacter baylyi ADP1 |
39.655 |
100 |
0.422 |
| comEA | Vibrio cholerae C6706 |
39.623 |
97.248 |
0.385 |
| comEA | Vibrio cholerae strain A1552 |
39.623 |
97.248 |
0.385 |