Detailed information NTG0156102

Bioinformatically predicted

Overview

• Name: dprA/cilB/dalA
• Type: Machinery gene
• Locus tag: RN86_RS07955
• Genome accession: NZ_CP012648
• Coordinates: 1626928..1627770 (+)
• Length: 280 a.a.
• NCBI ID: WP_053794588.1
• Uniprot ID: -
• Organism: Streptococcus gordonii strain KCOM 1506 (= ChDC B679)
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1621928..1632770

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RN86_RS07925 (RN86_07920)	dapA	1622128..1623063 (+)	936	WP_008808607.1	4-hydroxy-tetrahydrodipicolinate synthase	-
RN86_RS07930 (RN86_07925)	-	1623304..1623642 (+)	339	WP_008808609.1	ATP cone domain-containing protein	-
RN86_RS07935 (RN86_07930)	ylqF	1623787..1624638 (+)	852	WP_046165535.1	ribosome biogenesis GTPase YlqF	-
RN86_RS07940 (RN86_07935)	-	1624625..1625389 (+)	765	WP_046165536.1	ribonuclease HII	-
RN86_RS07945 (RN86_07940)	-	1625407..1626225 (+)	819	WP_053794587.1	PRD domain-containing protein	-
RN86_RS07950 (RN86_07945)	-	1626222..1626800 (+)	579	WP_046165538.1	sugar O-acetyltransferase	-
RN86_RS07955 (RN86_07950)	dprA/cilB/dalA	1626928..1627770 (+)	843	WP_053794588.1	DNA-processing protein DprA	Machinery gene
RN86_RS07960 (RN86_07955)	topA	1627854..1629947 (+)	2094	WP_155465122.1	type I DNA topoisomerase	-
RN86_RS07965 (RN86_07960)	-	1630057..1630740 (+)	684	WP_046165541.1	SatD family protein	-
RN86_RS07970 (RN86_07965)	-	1630724..1631431 (+)	708	WP_046165542.1	DUF3307 domain-containing protein	-
RN86_RS07975 (RN86_07970)	-	1631451..1631945 (+)	495	WP_046165543.1	phosphoribosylanthranilate isomerase	-

Sequence

Protein

• Length: 280 a.a.
• Molecular weight: 31172.80 Da
• Isoelectric Point: 6.2437

>NTDB_id=156102 RN86_RS07955 WP_053794588.1 1626928..1627770(+) (dprA/cilB/dalA) [Streptococcus gordonii strain KCOM 1506 (= ChDC B679)]
MKNYDIYKLKHAGLTNGQVLNVLRYAENKEKELSLRDIAVVSECRNPALFMERYKQIDDDFLKKSFEEFPSFSILDDIYP
WDLSEIYNPPALLFYQGNIDLLELPKVAVVGSRDSSKLGNQSVQKIIKELNNELIIVSGLARGIDTAAHMAALQNGGRTI
AVIGTGLDVFYPKANKKLQSYIGKNHLVLSEYGPGEQPLKFHFPERNRIIAGLCRGVIVAEAKMRSGSLITCERAMEEGR
DVFAIPGSILDGKSDGCHHLIQEGAKCIMSGSDVLSEFDF

Nucleotide

• Length: 843 bp

>NTDB_id=156102 RN86_RS07955 WP_053794588.1 1626928..1627770(+) (dprA/cilB/dalA) [Streptococcus gordonii strain KCOM 1506 (= ChDC B679)]
ATGAAAAACTATGATATTTATAAATTGAAACATGCTGGACTGACTAATGGACAAGTTCTTAATGTCTTGAGATATGCTGA
AAACAAGGAAAAGGAGCTTTCTTTGCGTGATATAGCGGTGGTATCAGAATGTCGTAATCCTGCTCTGTTTATGGAACGCT
ATAAGCAAATTGATGACGATTTTTTAAAGAAATCCTTTGAGGAATTTCCCTCTTTTTCTATCTTGGATGATATTTATCCA
TGGGATTTGAGTGAGATATATAACCCACCTGCTCTTTTGTTTTATCAGGGAAATATTGATCTGCTTGAATTGCCAAAAGT
AGCAGTAGTCGGAAGTCGTGATAGTAGCAAGCTTGGTAATCAGTCCGTTCAGAAAATTATTAAAGAATTGAATAATGAAT
TAATCATTGTGAGTGGGTTAGCGCGTGGGATTGACACAGCTGCTCATATGGCAGCCTTACAGAATGGCGGTCGAACTATA
GCTGTTATTGGGACTGGATTAGATGTTTTTTATCCTAAAGCCAATAAGAAACTTCAGTCCTATATTGGCAAAAATCACCT
GGTTTTATCAGAATACGGTCCTGGTGAACAACCCTTGAAGTTTCATTTTCCTGAACGTAATCGAATTATCGCAGGTTTGT
GCAGAGGCGTCATTGTTGCTGAAGCTAAGATGAGATCTGGAAGCTTGATAACTTGTGAGCGAGCGATGGAAGAAGGAAGA
GATGTATTTGCTATACCTGGATCAATTCTAGATGGAAAATCTGATGGCTGCCATCATTTGATTCAAGAAGGCGCTAAGTG
CATTATGTCGGGCTCTGATGTCCTGTCTGAGTTTGATTTTTAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (74-269)

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (1-60)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	79.286	100	0.793
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	78.929	100	0.789
dprA/cilB/dalA	Streptococcus pneumoniae D39	78.929	100	0.789
dprA/cilB/dalA	Streptococcus pneumoniae R6	78.929	100	0.789
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	78.929	100	0.789
dprA/cilB/dalA	Streptococcus mitis SK321	78.571	100	0.786
dprA	Streptococcus mutans UA159	66.429	100	0.664
dprA	Lactococcus lactis subsp. cremoris KW2	57.914	99.286	0.575
dprA	Legionella pneumophila strain ERS1305867	43.096	85.357	0.368