Detailed information NTG0156075

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: RN86_RS04175
• Genome accession: NZ_CP012648
• Coordinates: 845077..845514 (+)
• Length: 145 a.a.
• NCBI ID: WP_053794327.1
• Uniprot ID: -
• Organism: Streptococcus gordonii strain KCOM 1506 (= ChDC B679)
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 840077..850514

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RN86_RS04145 (RN86_04140)	-	841751..842119 (+)	369	WP_046164737.1	DUF1033 family protein	-
RN86_RS04150 (RN86_04145)	comYA	842221..843159 (+)	939	WP_046164736.1	competence type IV pilus ATPase ComGA	Machinery gene
RN86_RS04155 (RN86_04150)	comYB	843092..844126 (+)	1035	WP_046164735.1	competence type IV pilus assembly protein ComGB	Machinery gene
RN86_RS04160 (RN86_04155)	comYC	844123..844440 (+)	318	WP_012130940.1	competence type IV pilus major pilin ComGC	Machinery gene
RN86_RS04165 (RN86_04160)	comYD	844400..844828 (+)	429	WP_069097080.1	competence type IV pilus minor pilin ComGD	Machinery gene
RN86_RS04170 (RN86_04165)	comGE/cglE	844800..845093 (+)	294	WP_046164733.1	competence type IV pilus minor pilin ComGE	Machinery gene
RN86_RS04175 (RN86_04170)	comGF/cglF	845077..845514 (+)	438	WP_053794327.1	competence type IV pilus minor pilin ComGF	Machinery gene
RN86_RS04180 (RN86_04175)	comGG	845495..845926 (+)	432	WP_253276489.1	competence type IV pilus minor pilin ComGG	-
RN86_RS04185 (RN86_04180)	comYH	845957..846910 (+)	954	WP_053794328.1	class I SAM-dependent methyltransferase	Machinery gene
RN86_RS04190 (RN86_04185)	-	846960..848150 (+)	1191	WP_045634156.1	acetate kinase	-
RN86_RS04195 (RN86_04190)	-	848197..848862 (+)	666	WP_053794329.1	type II CAAX endopeptidase family protein	-
RN86_RS04200 (RN86_04195)	folP	848939..849904 (+)	966	WP_053794330.1	dihydropteroate synthase	-

Sequence

Protein

• Length: 145 a.a.
• Molecular weight: 16552.08 Da
• Isoelectric Point: 6.9916

>NTDB_id=156075 RN86_RS04175 WP_053794327.1 845077..845514(+) (comGF/cglF) [Streptococcus gordonii strain KCOM 1506 (= ChDC B679)]
MLKKGKVGAFTLLEALVALLVISGGLLVFQAMTKLLASEIQLQEQTKAKEWLLFADQLDVELSRSHFEKVEQNKLYVKQD
GKSIAFGKSKSDDFRKTDANGRGYQPMIYGLEAAQIHKEGQIVHLHLQFKDGLEREYIYRVEEEH

Nucleotide

• Length: 438 bp

>NTDB_id=156075 RN86_RS04175 WP_053794327.1 845077..845514(+) (comGF/cglF) [Streptococcus gordonii strain KCOM 1506 (= ChDC B679)]
ATGTTGAAAAAAGGTAAAGTAGGAGCTTTTACCTTGCTGGAAGCCTTAGTAGCCCTCTTGGTCATCAGTGGTGGCCTCTT
GGTTTTTCAAGCTATGACTAAGCTTCTAGCCAGCGAAATTCAGCTTCAAGAGCAGACTAAGGCTAAGGAATGGCTCTTGT
TTGCGGACCAGCTAGATGTAGAACTATCTCGTAGCCATTTTGAAAAGGTTGAGCAAAACAAGCTTTATGTTAAACAAGAT
GGTAAGTCGATTGCCTTTGGTAAGTCTAAAAGCGATGATTTTCGAAAGACGGATGCGAATGGCCGTGGTTATCAACCCAT
GATTTATGGCTTAGAAGCTGCTCAAATACATAAAGAAGGTCAGATAGTTCATTTGCATCTGCAGTTTAAGGACGGCTTAG
AAAGAGAGTACATCTATCGTGTTGAAGAAGAACATTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (38-134)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae Rx1	68.31	97.931	0.669
comGF/cglF	Streptococcus pneumoniae D39	68.31	97.931	0.669
comGF/cglF	Streptococcus pneumoniae R6	68.31	97.931	0.669
comGF/cglF	Streptococcus pneumoniae TIGR4	68.31	97.931	0.669
comGF/cglF	Streptococcus mitis NCTC 12261	66.667	97.241	0.648
comGF/cglF	Streptococcus mitis SK321	65.248	97.241	0.634
comYF	Streptococcus mutans UA140	47.183	97.931	0.462
comYF	Streptococcus mutans UA159	46.479	97.931	0.455
comGF	Lactococcus lactis subsp. cremoris KW2	42.857	96.552	0.414