Detailed information NTG0152984

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: NX99_RS00805
• Genome accession: NZ_CP015282
• Coordinates: 265340..266251 (-)
• Length: 303 a.a.
• NCBI ID: WP_021143976.1
• Uniprot ID: -
• Organism: Streptococcus salivarius strain ATCC 27945
• Function: activate transcription of comX; activate transcription of comS (predicted from homology) Competence regulation

Genomic Context

Location: 260340..271251

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NX99_RS00780 (NX99_00775)	-	260371..260886 (+)	516	WP_084914414.1	DUF3592 domain-containing protein	-
NX99_RS00785 (NX99_00780)	-	260972..262021 (+)	1050	WP_084914416.1	hypothetical protein	-
NX99_RS00790 (NX99_00785)	-	262153..263094 (+)	942	WP_232313541.1	hypothetical protein	-
NX99_RS10040	-	263075..263398 (+)	324	WP_232313542.1	hypothetical protein	-
NX99_RS00795 (NX99_00790)	-	263466..264371 (+)	906	WP_084914417.1	hypothetical protein	-
NX99_RS00800 (NX99_00795)	-	264349..265233 (+)	885	WP_084914419.1	hypothetical protein	-
NX99_RS00805 (NX99_00800)	comR	265340..266251 (-)	912	WP_021143976.1	helix-turn-helix domain-containing protein	Regulator
NX99_RS00810 (NX99_00805)	-	266409..267128 (-)	720	WP_084914420.1	ABC transporter permease	-
NX99_RS00815 (NX99_00810)	-	267121..267957 (-)	837	WP_084914422.1	ABC transporter ATP-binding protein	-
NX99_RS00820 (NX99_00815)	comR	268030..268953 (-)	924	WP_084914423.1	helix-turn-helix domain-containing protein	Regulator
NX99_RS00825 (NX99_00820)	-	269170..269691 (+)	522	WP_223896436.1	RDD family protein	-
NX99_RS00830 (NX99_00825)	-	269816..270736 (+)	921	WP_084914425.1	multidrug resistance efflux transporter family protein	-

Sequence

Protein

• Length: 303 a.a.
• Molecular weight: 35766.25 Da
• Isoelectric Point: 4.7579

>NTDB_id=152984 NX99_RS00805 WP_021143976.1 265340..266251(-) (comR) [Streptococcus salivarius strain ATCC 27945]
MSEDIKIEIGKRIREERERQGLTREHVCDTEEELTVKQLMRIELGRSLPTIVKLQYISDKLGVSLNYLLGETKLDIPEDY
YQAKYKLMKSPVYGDLERIKKKLQDIEEIYEKYIDILPEDELLTIDIIERTLNFISEEKKEDLVEIVFEDYLNQVLKKEE
YTLNDLLLIKYYSVQCQGSSYDKATIEHFRMKLIKQRLQGDELSNVELLGALSAIAGIYVMHHDYKNMKTIVDKMYEVMH
SIMQHSYQPGIAMLEAKYYLFYENNRDKATDLYNKAILLAEAFGDQVFIKNLKIEIEKDLNIE

Nucleotide

• Length: 912 bp

>NTDB_id=152984 NX99_RS00805 WP_021143976.1 265340..266251(-) (comR) [Streptococcus salivarius strain ATCC 27945]
ATGTCTGAAGATATTAAAATCGAGATTGGAAAAAGAATTCGTGAGGAACGTGAACGTCAAGGATTAACACGTGAGCACGT
TTGTGATACCGAAGAAGAATTAACTGTCAAACAGTTGATGAGAATCGAGCTTGGACGTTCTTTACCAACCATTGTCAAAC
TGCAGTATATCAGTGATAAATTGGGAGTTTCCCTCAACTATTTGTTAGGTGAAACAAAACTAGACATTCCTGAAGACTAT
TATCAGGCTAAATATAAACTCATGAAATCTCCTGTCTATGGCGACCTCGAACGTATCAAGAAAAAGCTGCAGGACATTGA
AGAAATTTATGAAAAATATATTGACATTCTACCAGAGGACGAGCTGCTAACCATTGATATCATTGAAAGAACCCTGAATT
TTATATCTGAAGAGAAGAAAGAAGATCTTGTTGAGATTGTATTTGAAGACTATTTGAATCAGGTATTAAAAAAAGAAGAG
TATACCCTGAATGACCTTTTGTTGATAAAATACTACTCTGTACAATGTCAAGGGTCTTCATATGATAAAGCTACAATTGA
GCATTTTCGAATGAAGTTAATAAAACAAAGATTGCAAGGTGATGAATTATCCAATGTGGAACTATTGGGGGCTTTATCAG
CTATAGCTGGGATTTATGTCATGCATCATGACTATAAAAACATGAAAACTATTGTTGATAAAATGTATGAGGTCATGCAT
TCTATTATGCAACATTCCTATCAACCTGGGATAGCAATGCTTGAAGCAAAATATTATCTGTTCTATGAGAACAATAGAGA
TAAAGCAACTGATCTATATAATAAAGCTATCCTACTAGCGGAGGCTTTTGGCGACCAAGTCTTCATCAAAAATCTTAAAA
TAGAAATAGAAAAAGATTTAAATATAGAATAG

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (77-295)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus thermophilus LMG 18311	41.924	96.04	0.403
comR	Streptococcus salivarius strain HSISS4	41.924	96.04	0.403
comR	Streptococcus thermophilus LMD-9	41.581	96.04	0.399
comR	Streptococcus salivarius SK126	41.754	94.059	0.393
comR/comR1	Streptococcus sobrinus strain NIDR 6715-7	39.865	97.69	0.389
comR/comR2	Streptococcus sobrinus strain NIDR 6715-7	38.356	96.37	0.37