Detailed information
Bioinformatically predicted
Overview
| Name | comE1/comEA | Type | Machinery gene |
| Locus tag | ADJ80_RS04390 | Genome accession | NZ_CP012067 |
| Coordinates | 882570..882896 (+) | Length | 108 a.a. |
| NCBI ID | WP_005705031.1 | Uniprot ID | A0A0K1N2K6 |
| Organism | Aggregatibacter aphrophilus strain W10433 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 877570..887896
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ADJ80_RS04375 (ADJ80_04395) | ileS | 877643..880465 (+) | 2823 | WP_050693103.1 | isoleucine--tRNA ligase | - |
| ADJ80_RS04380 (ADJ80_04400) | lspA | 880548..881054 (+) | 507 | WP_050693104.1 | signal peptidase II | - |
| ADJ80_RS04385 (ADJ80_04405) | ispH | 881051..881995 (+) | 945 | WP_050693105.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| ADJ80_RS04390 (ADJ80_04410) | comE1/comEA | 882570..882896 (+) | 327 | WP_005705031.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| ADJ80_RS04395 (ADJ80_04415) | rdgB | 883006..883605 (+) | 600 | WP_050693106.1 | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase | - |
| ADJ80_RS04400 (ADJ80_04420) | - | 883661..883984 (+) | 324 | WP_005701684.1 | YbjQ family protein | - |
| ADJ80_RS04405 (ADJ80_04425) | hemW | 883998..885155 (+) | 1158 | WP_080988240.1 | radical SAM family heme chaperone HemW | - |
| ADJ80_RS04410 (ADJ80_04430) | - | 885311..885604 (+) | 294 | WP_050693108.1 | Imm40 family immunity protein | - |
| ADJ80_RS04415 (ADJ80_04435) | rpiA | 885777..886433 (+) | 657 | WP_050693109.1 | ribose-5-phosphate isomerase RpiA | - |
| ADJ80_RS04420 (ADJ80_04440) | serA | 886457..887689 (+) | 1233 | WP_050693110.1 | phosphoglycerate dehydrogenase | - |
Sequence
Protein
Download Length: 108 a.a. Molecular weight: 11432.17 Da Isoelectric Point: 9.6912
>NTDB_id=151026 ADJ80_RS04390 WP_005705031.1 882570..882896(+) (comE1/comEA) [Aggregatibacter aphrophilus strain W10433]
MKAMKHLLATAFVFGSVFAGSAVAAEKTAEPVQLEQPAVQNSVGDKVNINTATAAEIQKALVGIGAKKAEAVVQYREKHG
NFSAVEQLLEVQGIGKATLEKNRDRIAL
MKAMKHLLATAFVFGSVFAGSAVAAEKTAEPVQLEQPAVQNSVGDKVNINTATAAEIQKALVGIGAKKAEAVVQYREKHG
NFSAVEQLLEVQGIGKATLEKNRDRIAL
Nucleotide
Download Length: 327 bp
>NTDB_id=151026 ADJ80_RS04390 WP_005705031.1 882570..882896(+) (comE1/comEA) [Aggregatibacter aphrophilus strain W10433]
ATGAAAGCAATGAAGCATCTTTTAGCTACTGCCTTTGTGTTCGGTTCGGTGTTTGCAGGTTCTGCGGTTGCCGCAGAAAA
AACGGCTGAGCCGGTACAACTTGAACAACCGGCGGTGCAAAACAGTGTTGGTGATAAAGTGAATATTAACACCGCTACAG
CAGCAGAAATTCAAAAAGCGCTTGTAGGCATTGGTGCGAAAAAAGCGGAGGCGGTTGTGCAATATCGTGAAAAGCACGGT
AATTTCAGCGCAGTGGAACAATTATTGGAAGTACAGGGGATTGGTAAAGCGACATTAGAAAAGAATCGCGATCGTATCGC
ATTATAA
ATGAAAGCAATGAAGCATCTTTTAGCTACTGCCTTTGTGTTCGGTTCGGTGTTTGCAGGTTCTGCGGTTGCCGCAGAAAA
AACGGCTGAGCCGGTACAACTTGAACAACCGGCGGTGCAAAACAGTGTTGGTGATAAAGTGAATATTAACACCGCTACAG
CAGCAGAAATTCAAAAAGCGCTTGTAGGCATTGGTGCGAAAAAAGCGGAGGCGGTTGTGCAATATCGTGAAAAGCACGGT
AATTTCAGCGCAGTGGAACAATTATTGGAAGTACAGGGGATTGGTAAAGCGACATTAGAAAAGAATCGCGATCGTATCGC
ATTATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comE1/comEA | Haemophilus influenzae Rd KW20 |
61.947 |
100 |
0.648 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
54.867 |
100 |
0.574 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
42.857 |
97.222 |
0.417 |
| comEA | Vibrio cholerae C6706 |
47.619 |
77.778 |
0.37 |
| comEA | Vibrio cholerae strain A1552 |
47.619 |
77.778 |
0.37 |
| comEA | Acinetobacter baylyi ADP1 |
52 |
69.444 |
0.361 |