Detailed information    

insolico Bioinformatically predicted

Overview

Name   comM   Type   Machinery gene
Locus tag   AAX10_RS01460 Genome accession   NZ_CP011381
Coordinates   316437..317936 (+) Length   499 a.a.
NCBI ID   WP_046699648.1    Uniprot ID   -
Organism   Moraxella bovoculi strain 58086     
Function   require for natural transformation (predicted from homology)   
Unclear

Genomic Context

Location: 311437..322936
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAX10_RS01445 (AAX10_01455) - 311817..312764 (-) 948 WP_046699645.1 D-2-hydroxyacid dehydrogenase -
  AAX10_RS01450 (AAX10_01460) rapA 313026..315887 (+) 2862 WP_046699646.1 RNA polymerase-associated protein RapA -
  AAX10_RS01455 (AAX10_01465) - 315921..316274 (+) 354 WP_046699647.1 5-carboxymethyl-2-hydroxymuconate Delta-isomerase -
  AAX10_RS01460 (AAX10_01470) comM 316437..317936 (+) 1500 WP_046699648.1 YifB family Mg chelatase-like AAA ATPase Machinery gene
  AAX10_RS01465 (AAX10_01475) - 317968..318642 (-) 675 WP_046699649.1 phosphoglycolate phosphatase -
  AAX10_RS01470 (AAX10_01480) - 319160..319699 (+) 540 WP_046697802.1 porin family protein -
  AAX10_RS01480 (AAX10_01490) - 320081..321022 (+) 942 WP_046699650.1 polyprenyl synthetase family protein -
  AAX10_RS01485 (AAX10_01495) mutY 321099..322262 (-) 1164 WP_226997796.1 A/G-specific adenine glycosylase -

Sequence

Protein


Download         Length: 499 a.a.        Molecular weight: 53589.23 Da        Isoelectric Point: 8.0278

>NTDB_id=145309 AAX10_RS01460 WP_046699648.1 316437..317936(+) (comM) [Moraxella bovoculi strain 58086]
MSFAKIFTRSVVGLHAPSVLVEVHLSQGMPSLTIVGLPEAAVRESKDRVRSALINSDYDFPSRRLTINLAPADLPKDGSR
LDLPIAMGILAASGQVDESALDGFEFVGELALNGDLRPVSGALSVARAVKVTGRTLILPKENAAEAARVAGVKVIGADSL
AAVCRHLDVVSGVSNNQADLIALSESVSTTAQASYKLDLSDVKGQYHARRALEIAAAGGHSMLFKGSPGSGKTLMASRLP
SILPPLTDDEALEVASIYSVAGVAYEFGVRPYRQCHHTMSAVALSGGGSRPKPGEISLAHKGVLFLDELPEFDRKTLEVM
RQPIESKEIAISRANAQVTYPAEFQLIAAMNPCPCGYHGDPSNRCRCKPDQVRRYQDKISGPLLDRIDLHIHVPAMPLED
LQNAPQGESSDVVRERVIGARNFALRRQGKANNELSPSEIDIHIPLGATQKQLLTTAQSRLNLSARSYHRMLRVARTIAD
LSGAERVGTSHLAEALSYR

Nucleotide


Download         Length: 1500 bp        

>NTDB_id=145309 AAX10_RS01460 WP_046699648.1 316437..317936(+) (comM) [Moraxella bovoculi strain 58086]
ATGTCATTTGCCAAGATTTTTACTCGCTCTGTGGTTGGCTTGCACGCGCCATCGGTGTTGGTGGAGGTGCATTTATCACA
AGGCATGCCGTCTTTGACCATCGTTGGCTTGCCCGAGGCGGCAGTGCGAGAGAGTAAAGATCGCGTCCGCTCAGCGCTCA
TTAACAGTGATTATGACTTTCCCAGTCGCCGTCTAACCATTAACCTTGCGCCTGCCGATCTACCAAAAGACGGTTCGCGG
TTGGATTTGCCGATAGCGATGGGTATCTTGGCAGCGAGCGGCCAAGTAGACGAAAGTGCGCTTGATGGGTTTGAATTCGT
CGGCGAACTGGCGTTAAATGGCGATCTGCGTCCCGTCTCAGGCGCGTTGTCAGTTGCTCGCGCTGTCAAGGTGACAGGGC
GAACGCTTATCTTACCCAAAGAGAATGCAGCAGAAGCGGCGCGTGTGGCAGGGGTGAAAGTCATCGGTGCGGACAGCTTG
GCTGCGGTATGTCGCCATTTAGATGTGGTAAGCGGTGTTAGCAATAATCAAGCGGATTTAATTGCGCTTAGCGAATCAGT
ATCCACGACAGCACAGGCAAGCTATAAGCTTGATTTGTCCGATGTGAAAGGACAGTATCACGCAAGGCGCGCGCTTGAGA
TCGCTGCGGCGGGCGGGCATTCGATGTTATTCAAGGGATCTCCGGGCTCAGGCAAGACGTTGATGGCAAGCCGTCTGCCG
AGCATCTTGCCGCCATTGACCGACGATGAGGCCTTAGAGGTGGCAAGTATCTATTCGGTGGCGGGCGTAGCTTATGAATT
TGGTGTGCGTCCGTATAGACAATGTCATCACACAATGAGTGCGGTAGCCTTGTCTGGAGGGGGTTCACGCCCAAAACCTG
GTGAGATTAGCCTTGCCCATAAAGGCGTTCTCTTCTTAGATGAATTACCCGAGTTCGACCGTAAGACATTGGAGGTCATG
CGTCAGCCGATCGAGTCAAAGGAAATCGCCATCAGCCGTGCCAATGCACAAGTGACCTATCCAGCAGAGTTCCAATTGAT
TGCTGCGATGAACCCCTGTCCATGTGGATATCATGGCGACCCATCCAATCGTTGCCGCTGTAAGCCTGACCAAGTACGTC
GTTATCAAGATAAGATATCAGGACCATTGCTTGATCGCATTGACTTACATATCCATGTCCCTGCCATGCCACTAGAAGAC
TTGCAGAACGCACCACAAGGCGAATCATCGGATGTCGTGCGTGAGCGTGTGATCGGGGCGCGTAATTTTGCGCTAAGGCG
TCAAGGTAAGGCTAATAACGAGCTAAGCCCTAGCGAGATTGATATACATATCCCGCTAGGTGCGACACAGAAGCAACTGC
TTACCACTGCTCAGTCGCGCCTCAACCTATCGGCACGTAGCTATCACCGAATGCTAAGAGTAGCACGTACCATCGCTGAT
CTGTCAGGTGCAGAGCGGGTAGGAACATCGCACCTAGCAGAAGCGCTAAGCTATCGCTAA

Domains

Predicted by InterproScan.

Magnesium chelatase, subunit ChlI (Mg_chelatase)

(198-399)

Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C)

(407-499)

Subunit ChlI of Mg-chelatase (ChlI)

(21-142)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comM Haemophilus influenzae Rd KW20

50.791

100

0.515
  comM Glaesserella parasuis strain SC1401

50.296

100

0.511
  comM Legionella pneumophila str. Paris

49.012

100

0.497
  comM Legionella pneumophila strain ERS1305867

49.012

100

0.497
  comM Vibrio campbellii strain DS40M4

49.304

100

0.497
  comM Vibrio cholerae strain A1552

49.304

100

0.497
  RA0C_RS07335 Riemerella anatipestifer ATCC 11845 = DSM 15868

45.059

100

0.457

Multiple sequence alignment