Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | AAW51_RS00485 | Genome accession | NZ_CP011371 |
| Coordinates | 105381..105917 (-) | Length | 178 a.a. |
| NCBI ID | WP_053013973.1 | Uniprot ID | - |
| Organism | Caldimonas brevitalea strain DSM 7029 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 100381..110917
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAW51_RS00465 (AAW51_0094) | - | 100706..101053 (+) | 348 | WP_047193048.1 | phage holin family protein | - |
| AAW51_RS00470 (AAW51_0095) | - | 101197..102876 (-) | 1680 | WP_083437966.1 | M48 family metalloprotease | - |
| AAW51_RS00475 (AAW51_0096) | moaC | 102886..103404 (+) | 519 | WP_047193049.1 | cyclic pyranopterin monophosphate synthase MoaC | - |
| AAW51_RS00480 (AAW51_0097) | - | 103442..105193 (-) | 1752 | WP_047193050.1 | PglL family O-oligosaccharyltransferase | - |
| AAW51_RS00485 (AAW51_0098) | pilE | 105381..105917 (-) | 537 | WP_053013973.1 | pilin | Machinery gene |
| AAW51_RS00490 (AAW51_0099) | - | 106109..106870 (-) | 762 | WP_047193052.1 | MBL fold metallo-hydrolase | - |
| AAW51_RS00495 (AAW51_0100) | - | 106898..109147 (-) | 2250 | WP_238947715.1 | CHASE2 domain-containing protein | - |
| AAW51_RS00500 (AAW51_0101) | - | 109383..110066 (-) | 684 | WP_047193053.1 | FHA domain-containing protein | - |
| AAW51_RS00505 (AAW51_0102) | - | 110113..110895 (-) | 783 | WP_047193054.1 | Stp1/IreP family PP2C-type Ser/Thr phosphatase | - |
Sequence
Protein
Download Length: 178 a.a. Molecular weight: 18461.17 Da Isoelectric Point: 4.9007
>NTDB_id=145176 AAW51_RS00485 WP_053013973.1 105381..105917(-) (pilE) [Caldimonas brevitalea strain DSM 7029]
MKSLKRAAQKGFTLIELMIVVAIIGILAAVALPAYQDYTVRAKITEGLSLASALKADMSSMYASDGMAGVAAYATQVAAA
PPESKYVEEIRIDGTTGVITIEYREENIGTIADARTIVLTPYLNAAGTITRLSAAAAGATGSVDWACASDANSSATTRDL
LNPVAGTLPARFAPNECK
MKSLKRAAQKGFTLIELMIVVAIIGILAAVALPAYQDYTVRAKITEGLSLASALKADMSSMYASDGMAGVAAYATQVAAA
PPESKYVEEIRIDGTTGVITIEYREENIGTIADARTIVLTPYLNAAGTITRLSAAAAGATGSVDWACASDANSSATTRDL
LNPVAGTLPARFAPNECK
Nucleotide
Download Length: 537 bp
>NTDB_id=145176 AAW51_RS00485 WP_053013973.1 105381..105917(-) (pilE) [Caldimonas brevitalea strain DSM 7029]
ATGAAGTCTCTGAAGCGCGCCGCCCAAAAGGGCTTCACGCTGATCGAACTGATGATCGTCGTGGCGATCATCGGTATCCT
GGCTGCCGTGGCCCTGCCCGCGTACCAGGACTACACCGTGCGCGCGAAGATCACGGAAGGTCTCAGCCTGGCCAGCGCGC
TGAAGGCTGACATGTCTAGCATGTACGCTTCGGACGGCATGGCTGGCGTTGCGGCCTACGCGACCCAAGTGGCCGCCGCT
CCCCCGGAGTCCAAGTACGTCGAAGAGATTCGCATCGACGGCACCACTGGCGTGATCACGATCGAATACCGCGAAGAAAA
CATCGGCACCATCGCGGATGCGCGCACCATCGTTCTGACCCCTTACCTCAACGCAGCCGGCACGATCACCCGCTTGAGCG
CCGCCGCCGCCGGTGCCACCGGTTCGGTGGACTGGGCTTGCGCATCTGACGCCAACAGCAGTGCCACCACTCGCGATCTG
CTCAACCCGGTCGCCGGTACCCTGCCTGCCCGCTTTGCTCCTAACGAGTGCAAGTAA
ATGAAGTCTCTGAAGCGCGCCGCCCAAAAGGGCTTCACGCTGATCGAACTGATGATCGTCGTGGCGATCATCGGTATCCT
GGCTGCCGTGGCCCTGCCCGCGTACCAGGACTACACCGTGCGCGCGAAGATCACGGAAGGTCTCAGCCTGGCCAGCGCGC
TGAAGGCTGACATGTCTAGCATGTACGCTTCGGACGGCATGGCTGGCGTTGCGGCCTACGCGACCCAAGTGGCCGCCGCT
CCCCCGGAGTCCAAGTACGTCGAAGAGATTCGCATCGACGGCACCACTGGCGTGATCACGATCGAATACCGCGAAGAAAA
CATCGGCACCATCGCGGATGCGCGCACCATCGTTCTGACCCCTTACCTCAACGCAGCCGGCACGATCACCCGCTTGAGCG
CCGCCGCCGCCGGTGCCACCGGTTCGGTGGACTGGGCTTGCGCATCTGACGCCAACAGCAGTGCCACCACTCGCGATCTG
CTCAACCCGGTCGCCGGTACCCTGCCTGCCCGCTTTGCTCCTAACGAGTGCAAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Neisseria elongata subsp. glycolytica ATCC 29315 |
43.216 |
100 |
0.483 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
43.011 |
100 |
0.449 |
| pilA2 | Legionella pneumophila str. Paris |
42.197 |
97.191 |
0.41 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
41.618 |
97.191 |
0.404 |
| comP | Acinetobacter baylyi ADP1 |
37.222 |
100 |
0.376 |