Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | QF06_RS19185 | Genome accession | NZ_CP010014 |
| Coordinates | 3893530..3893820 (-) | Length | 96 a.a. |
| NCBI ID | WP_003226760.1 | Uniprot ID | A0A7G9PCZ4 |
| Organism | Bacillus sp. YP1 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3888530..3898820
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QF06_RS19145 (QF06_19150) | darA | 3888553..3888882 (+) | 330 | WP_003242755.1 | cyclic di-AMP receptor DarA | - |
| QF06_RS19150 (QF06_19155) | - | 3888895..3889335 (+) | 441 | WP_009966249.1 | YaaR family protein | - |
| QF06_RS19155 (QF06_19160) | holB | 3889347..3890336 (+) | 990 | WP_003226770.1 | DNA polymerase III subunit delta' | - |
| QF06_RS19160 (QF06_19165) | ricT | 3890339..3891166 (+) | 828 | WP_003226767.1 | competence/sporulation regulator complex protein RicT | - |
| QF06_RS19165 (QF06_19170) | yabA | 3891181..3891540 (+) | 360 | WP_003218308.1 | replication initiation-control protein YabA | - |
| QF06_RS19170 (QF06_19175) | - | 3891599..3892342 (+) | 744 | WP_003226765.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| QF06_RS19175 (QF06_19180) | - | 3892329..3892628 (+) | 300 | WP_003242983.1 | GIY-YIG nuclease family protein | - |
| QF06_RS19180 (QF06_19185) | rsmI | 3892603..3893481 (+) | 879 | WP_003243457.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| QF06_RS19185 (QF06_19190) | abrB | 3893530..3893820 (-) | 291 | WP_003226760.1 | transition state genes transcriptional regulator AbrB | Regulator |
| QF06_RS19190 (QF06_19195) | metG | 3894315..3896309 (+) | 1995 | WP_003226758.1 | methionine--tRNA ligase | - |
| QF06_RS19195 (QF06_19200) | - | 3896389..3897156 (+) | 768 | WP_014475570.1 | TatD family hydrolase | - |
| QF06_RS19200 (QF06_19205) | - | 3897312..3898625 (+) | 1314 | WP_015715099.1 | ubiquitin-like domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10772.62 Da Isoelectric Point: 6.3482
>NTDB_id=133602 QF06_RS19185 WP_003226760.1 3893530..3893820(-) (abrB) [Bacillus sp. YP1]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
Nucleotide
Download Length: 291 bp
>NTDB_id=133602 QF06_RS19185 WP_003226760.1 3893530..3893820(-) (abrB) [Bacillus sp. YP1]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |