Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | QF06_RS15640 | Genome accession | NZ_CP010014 |
| Coordinates | 3168249..3168842 (+) | Length | 197 a.a. |
| NCBI ID | WP_003228214.1 | Uniprot ID | A0A199WEF2 |
| Organism | Bacillus sp. YP1 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3163249..3173842
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QF06_RS15610 (QF06_15610) | aspP | 3164221..3165783 (+) | 1563 | WP_003228228.1 | aspartate/proton symporter AspP | - |
| QF06_RS15615 (QF06_15615) | - | 3165878..3166462 (+) | 585 | WP_003244443.1 | TetR family transcriptional regulator | - |
| QF06_RS15620 (QF06_15620) | - | 3166545..3166880 (+) | 336 | WP_041850504.1 | QacE family quaternary ammonium compound efflux SMR transporter | - |
| QF06_RS15625 (QF06_15625) | - | 3166880..3167200 (+) | 321 | WP_003228222.1 | QacE family quaternary ammonium compound efflux SMR transporter | - |
| QF06_RS15630 (QF06_15630) | - | 3167236..3167748 (-) | 513 | WP_014478056.1 | DUF3231 family protein | - |
| QF06_RS15640 (QF06_15640) | clpP | 3168249..3168842 (+) | 594 | WP_003228214.1 | ATP-dependent Clp endopeptidase proteolytic subunit ClpP | Regulator |
| QF06_RS15645 (QF06_15645) | pgmB | 3168887..3169561 (-) | 675 | WP_041850503.1 | beta-phosphoglucomutase | - |
| QF06_RS15650 (QF06_15650) | malL | 3169558..3171243 (-) | 1686 | WP_041850502.1 | oligo-1,6-glucosidase | - |
| QF06_RS15655 (QF06_15655) | mdxK | 3171236..3173509 (-) | 2274 | WP_041850501.1 | maltose phosphorylase | - |
Sequence
Protein
Download Length: 197 a.a. Molecular weight: 21682.00 Da Isoelectric Point: 4.9416
>NTDB_id=133587 QF06_RS15640 WP_003228214.1 3168249..3168842(+) (clpP) [Bacillus sp. YP1]
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQ
PLEVIERDTDRDNFKSAEEALEYGLIDKILTHTEDKK
MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIYDT
MQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQ
PLEVIERDTDRDNFKSAEEALEYGLIDKILTHTEDKK
Nucleotide
Download Length: 594 bp
>NTDB_id=133587 QF06_RS15640 WP_003228214.1 3168249..3168842(+) (clpP) [Bacillus sp. YP1]
ATGAATTTAATACCTACAGTCATTGAACAAACGAACCGCGGAGAAAGAGCGTATGACATTTATTCTCGTCTATTAAAGGA
TCGTATCATCATGCTTGGATCTGCGATTGATGACAACGTTGCGAACTCCATCGTGTCACAGCTTTTATTCTTAGCAGCAG
AAGACCCTGAAAAAGAAATTTCTCTTTACATCAACAGCCCGGGCGGCTCTATTACAGCCGGTATGGCGATCTATGATACC
ATGCAGTTTATTAAGCCGAAGGTATCTACAATTTGTATCGGTATGGCTGCGTCAATGGGCGCGTTCCTGCTTGCAGCCGG
CGAAAAAGGCAAACGCTATGCACTTCCAAACAGTGAAGTCATGATTCACCAGCCTCTTGGCGGTGCGCAAGGTCAAGCGA
CAGAAATTGAAATTGCTGCGAAACGCATTCTCTTGCTTCGCGACAAATTAAACAAAGTCCTAGCTGAACGTACTGGCCAG
CCGCTTGAAGTGATCGAACGTGACACAGACCGTGATAACTTCAAGTCTGCTGAAGAAGCGCTTGAATACGGCCTGATTGA
CAAAATTTTGACTCACACAGAAGACAAAAAGTAA
ATGAATTTAATACCTACAGTCATTGAACAAACGAACCGCGGAGAAAGAGCGTATGACATTTATTCTCGTCTATTAAAGGA
TCGTATCATCATGCTTGGATCTGCGATTGATGACAACGTTGCGAACTCCATCGTGTCACAGCTTTTATTCTTAGCAGCAG
AAGACCCTGAAAAAGAAATTTCTCTTTACATCAACAGCCCGGGCGGCTCTATTACAGCCGGTATGGCGATCTATGATACC
ATGCAGTTTATTAAGCCGAAGGTATCTACAATTTGTATCGGTATGGCTGCGTCAATGGGCGCGTTCCTGCTTGCAGCCGG
CGAAAAAGGCAAACGCTATGCACTTCCAAACAGTGAAGTCATGATTCACCAGCCTCTTGGCGGTGCGCAAGGTCAAGCGA
CAGAAATTGAAATTGCTGCGAAACGCATTCTCTTGCTTCGCGACAAATTAAACAAAGTCCTAGCTGAACGTACTGGCCAG
CCGCTTGAAGTGATCGAACGTGACACAGACCGTGATAACTTCAAGTCTGCTGAAGAAGCGCTTGAATACGGCCTGATTGA
CAAAATTTTGACTCACACAGAAGACAAAAAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
68.617 |
95.431 |
0.655 |
| clpP | Streptococcus thermophilus LMG 18311 |
58.163 |
99.492 |
0.579 |
| clpP | Streptococcus thermophilus LMD-9 |
58.163 |
99.492 |
0.579 |
| clpP | Streptococcus pneumoniae D39 |
57.812 |
97.462 |
0.563 |
| clpP | Streptococcus pneumoniae Rx1 |
57.812 |
97.462 |
0.563 |
| clpP | Streptococcus pneumoniae R6 |
57.812 |
97.462 |
0.563 |
| clpP | Streptococcus pneumoniae TIGR4 |
57.812 |
97.462 |
0.563 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
57.895 |
96.447 |
0.558 |
| clpP | Streptococcus pyogenes JRS4 |
56.122 |
99.492 |
0.558 |
| clpP | Streptococcus pyogenes MGAS315 |
56.122 |
99.492 |
0.558 |
| clpP | Streptococcus mutans UA159 |
54.822 |
100 |
0.548 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
55.789 |
96.447 |
0.538 |