Detailed information NTG0127710

Bioinformatically predicted

Overview

• Name: pilQ
• Type: Machinery gene
• Locus tag: IX87_RS12510
• Genome accession: NZ_CP009257
• Coordinates: 2470686..2472851 (-)
• Length: 721 a.a.
• NCBI ID: WP_001017038.1
• Uniprot ID: A0A427R068
• Organism: Acinetobacter baumannii strain AB30
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2465686..2477851

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IX87_RS23490	tnpA	2466467..2466688 (+)	222	WP_000201914.1	IS66 family insertion sequence element accessory protein TnpA	-
IX87_RS22300	-	2466589..2466795 (+)	207	WP_040110388.1	hypothetical protein	-
IX87_RS12485 (IX87_12765)	aac(6')-Ian	2466747..2467319 (-)	573	WP_000960976.1	aminoglycoside N-acetyltransferase AAC(6')-Ian	-
IX87_RS12490 (IX87_12770)	-	2467542..2468246 (-)	705	WP_001067784.1	IS6-like element IS1006 family transposase	-
IX87_RS12495	-	2468319..2468978 (-)	660	Protein_2443	hypothetical protein	-
IX87_RS12500 (IX87_12780)	aroB	2468994..2470076 (-)	1083	WP_042791531.1	3-dehydroquinate synthase	-
IX87_RS12505 (IX87_12785)	aroK	2470105..2470674 (-)	570	WP_000643712.1	shikimate kinase AroK	-
IX87_RS12510 (IX87_12790)	pilQ	2470686..2472851 (-)	2166	WP_001017038.1	type IV pilus secretin PilQ family protein	Machinery gene
IX87_RS12515 (IX87_12795)	pilP	2472914..2473441 (-)	528	WP_000695058.1	pilus assembly protein PilP	Machinery gene
IX87_RS12520 (IX87_12800)	pilO	2473452..2474192 (-)	741	WP_000076101.1	type 4a pilus biogenesis protein PilO	Machinery gene
IX87_RS12525 (IX87_12805)	pilN	2474189..2474830 (-)	642	WP_000201227.1	PilN domain-containing protein	Machinery gene
IX87_RS12530 (IX87_12810)	pilM	2474830..2475888 (-)	1059	WP_002014066.1	pilus assembly protein PilM	Machinery gene

Sequence

Protein

• Length: 721 a.a.
• Molecular weight: 77921.31 Da
• Isoelectric Point: 6.5404

>NTDB_id=127710 IX87_RS12510 WP_001017038.1 2470686..2472851(-) (pilQ) [Acinetobacter baumannii strain AB30]
MNHVFRQFSMGAVAIAIMQAASAQVSMTNIVPMQIAGQGTEIRVMFNGLPPQPQAYQLENPSRLILDFDKAQQGLKQSKI
SVATNETSSVDVTSDDQRSRLTVNLKDAGAFTTRVEGNTFILKINSAQTSNKPLPVVSAQPQGVSNIGFQRGSQGEGLVV
VDLLGSNTPVDVQQQGSKVVIRTIGTKIPTHLARRLNVNDFATPVSSIDAYNDKGVGVITIQSSGSYEYMAYQAENKLTI
SLKRPQDKNVTSLYKTPNYSGNKLSLDFQDIEVRRVLQLLADFTGINMVAADSVQGNITLRLKDVPWDQALDIILKTKNL
DKRRNGNVIWIAPVAELIKAEEEEAKAVAQSVKLAPLQTEYIQLKYAKAGDIMGLITQGSNNSNGLQHTSGGGTSTSTNL
NTGVDSLGNNVGSLLSPRGTITQDDRTNTLIINDTAQSIDQIRKMIDLLDVQVKQVMVEARIVRASTSFTKELGVKWGIL
SQGITNNNNLLVGGSETTLWNLREPKKDETTGGYKYTIERPDNLNVDLGVSNPAGSIAFGLISMSDFMLDLELSALQADG
YGEVISTPKVMTADKQTAKVATGQQVPYQSTTNSAAGSTATTSFKDALLSLNVTPSITPDGKIQMKLDISKDSVAGAAPN
GELILNKNNINTNVLVDNGETVILGGVFEQTTMNSQTKVPFFGDIPVVGRLFRKDVKSDDKQELLIFVTPRIVNDTLARN
H

Nucleotide

• Length: 2166 bp

>NTDB_id=127710 IX87_RS12510 WP_001017038.1 2470686..2472851(-) (pilQ) [Acinetobacter baumannii strain AB30]
ATGAATCACGTATTCCGTCAGTTTTCTATGGGGGCTGTAGCTATTGCGATTATGCAGGCTGCATCTGCACAGGTCAGCAT
GACCAATATTGTACCAATGCAAATTGCAGGTCAGGGCACAGAAATTAGAGTCATGTTTAATGGCTTGCCACCACAACCAC
AAGCTTACCAACTTGAAAATCCTTCACGTTTAATACTTGATTTTGATAAGGCACAGCAAGGTTTAAAACAGTCTAAAATT
AGTGTTGCAACTAATGAGACAAGTTCTGTAGATGTTACTTCAGATGACCAGCGTTCACGTTTAACTGTAAACCTAAAAGA
TGCTGGAGCATTTACAACACGAGTAGAAGGTAATACCTTTATTTTAAAAATTAATTCTGCTCAAACAAGTAATAAGCCGC
TACCTGTGGTCTCAGCACAACCACAAGGTGTTTCAAATATTGGCTTTCAACGTGGTAGTCAGGGAGAAGGCCTGGTTGTT
GTAGATCTTTTAGGAAGTAATACGCCTGTAGATGTTCAGCAGCAGGGTAGTAAAGTCGTTATAAGAACAATAGGTACAAA
AATCCCGACACATTTAGCACGTCGCTTAAATGTAAATGATTTTGCAACCCCGGTTTCAAGTATTGATGCTTATAATGATA
AAGGGGTTGGTGTAATAACTATCCAGTCCTCTGGTAGCTATGAATATATGGCCTATCAGGCAGAGAATAAGCTCACGATC
AGTTTGAAACGTCCCCAAGATAAAAATGTTACCTCTTTATATAAAACGCCAAATTATTCAGGAAATAAACTTTCATTAGA
CTTCCAAGATATTGAAGTACGCCGTGTGTTGCAATTACTTGCTGATTTTACAGGCATCAATATGGTAGCTGCCGATAGTG
TACAAGGTAATATCACACTACGTTTAAAAGATGTACCTTGGGATCAGGCTCTTGATATTATTTTAAAAACTAAAAATCTT
GATAAACGCCGTAATGGCAATGTGATTTGGATTGCTCCAGTTGCAGAATTGATTAAGGCGGAAGAAGAAGAAGCGAAAGC
TGTTGCACAAAGTGTCAAACTTGCACCCTTACAGACTGAGTATATTCAACTGAAGTATGCTAAAGCTGGCGATATTATGG
GTCTCATTACACAAGGCTCAAATAATAGTAATGGTTTACAGCATACTTCTGGTGGAGGGACTTCAACTTCAACCAATTTA
AATACTGGAGTTGATAGTCTAGGCAATAATGTGGGTAGTTTGCTTAGCCCACGTGGCACTATTACCCAAGATGACCGAAC
TAATACTCTTATTATTAATGATACTGCTCAGTCAATTGATCAAATTCGTAAAATGATTGACTTGCTTGATGTGCAAGTTA
AACAAGTTATGGTTGAAGCACGTATTGTGAGAGCCTCTACGTCATTTACCAAAGAACTTGGTGTGAAGTGGGGTATTCTG
TCGCAAGGTATTACCAATAACAACAATTTGCTGGTTGGCGGTAGTGAAACAACTTTATGGAATTTACGCGAACCTAAAAA
AGATGAAACTACAGGTGGGTATAAATATACGATTGAGCGCCCAGATAACTTAAACGTGGATTTAGGAGTTTCTAATCCTG
CAGGAAGTATTGCTTTTGGCTTGATTAGTATGTCTGACTTTATGTTAGATCTTGAATTGTCTGCTTTACAAGCGGATGGT
TATGGTGAGGTTATTTCTACCCCTAAAGTCATGACTGCCGATAAACAAACAGCGAAAGTTGCAACTGGTCAACAAGTTCC
ATATCAATCTACAACTAACTCTGCAGCAGGTTCAACTGCTACAACATCTTTTAAAGATGCTTTGCTGAGTTTAAATGTGA
CACCAAGTATTACACCTGATGGCAAGATTCAAATGAAGTTGGATATTTCTAAGGATTCTGTAGCGGGTGCGGCTCCAAAT
GGAGAGTTGATTTTAAATAAAAATAATATCAACACCAATGTATTGGTAGATAATGGCGAAACTGTCATTTTGGGTGGTGT
TTTTGAGCAAACGACTATGAATTCACAAACCAAAGTTCCTTTCTTTGGTGATATTCCTGTTGTTGGGCGTTTATTTAGAA
AAGATGTAAAGTCTGATGATAAACAAGAGTTGCTGATTTTCGTTACACCACGAATTGTTAATGACACTTTAGCGAGAAAT
CATTAA

Domains

Predicted by InterproScan.

• Secretin and TonB N terminus short domain (STN) (291-333)

• Bacterial type II/III secretion system short domain (Secretin_N) (360-455)

• AMIN domain (AMIN) (39-121)

• Bacterial type II and III secretion system protein (Secretin) (555-713)

3D structure

• AlphaFold DB: A0A427R068

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilQ	Acinetobacter baumannii D1279779	99.861	100	0.999
pilQ	Acinetobacter baumannii strain A118	99.723	100	0.997
comQ	Acinetobacter baylyi ADP1	75.242	100	0.755
pilQ	Pseudomonas aeruginosa PAK	40.559	99.168	0.402