Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | IX87_RS12515 | Genome accession | NZ_CP009257 |
| Coordinates | 2472914..2473441 (-) | Length | 175 a.a. |
| NCBI ID | WP_000695058.1 | Uniprot ID | A0A3R9DHF3 |
| Organism | Acinetobacter baumannii strain AB30 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2467914..2478441
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IX87_RS12495 | - | 2468319..2468978 (-) | 660 | Protein_2443 | hypothetical protein | - |
| IX87_RS12500 (IX87_12780) | aroB | 2468994..2470076 (-) | 1083 | WP_042791531.1 | 3-dehydroquinate synthase | - |
| IX87_RS12505 (IX87_12785) | aroK | 2470105..2470674 (-) | 570 | WP_000643712.1 | shikimate kinase AroK | - |
| IX87_RS12510 (IX87_12790) | pilQ | 2470686..2472851 (-) | 2166 | WP_001017038.1 | type IV pilus secretin PilQ family protein | Machinery gene |
| IX87_RS12515 (IX87_12795) | pilP | 2472914..2473441 (-) | 528 | WP_000695058.1 | pilus assembly protein PilP | Machinery gene |
| IX87_RS12520 (IX87_12800) | pilO | 2473452..2474192 (-) | 741 | WP_000076101.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| IX87_RS12525 (IX87_12805) | pilN | 2474189..2474830 (-) | 642 | WP_000201227.1 | PilN domain-containing protein | Machinery gene |
| IX87_RS12530 (IX87_12810) | pilM | 2474830..2475888 (-) | 1059 | WP_002014066.1 | pilus assembly protein PilM | Machinery gene |
Sequence
Protein
Download Length: 175 a.a. Molecular weight: 19357.57 Da Isoelectric Point: 9.0270
>NTDB_id=127711 IX87_RS12515 WP_000695058.1 2472914..2473441(-) (pilP) [Acinetobacter baumannii strain AB30]
MKIKQITLCVLASVVLVGCDSRIDAVNQEMANIRNQPPLPIEPAPIFTPVPQFNYAAHQLKSPFMPSSLAAELKIMAGKR
VYPNFSRAPQPLESYALEALNMKGSMRNNRGQILALIQSPDQQIERVQVGNYMGMNQGRITHISPTQIDLVEIVPDGREG
YVERPRTLVLIGPAP
MKIKQITLCVLASVVLVGCDSRIDAVNQEMANIRNQPPLPIEPAPIFTPVPQFNYAAHQLKSPFMPSSLAAELKIMAGKR
VYPNFSRAPQPLESYALEALNMKGSMRNNRGQILALIQSPDQQIERVQVGNYMGMNQGRITHISPTQIDLVEIVPDGREG
YVERPRTLVLIGPAP
Nucleotide
Download Length: 528 bp
>NTDB_id=127711 IX87_RS12515 WP_000695058.1 2472914..2473441(-) (pilP) [Acinetobacter baumannii strain AB30]
ATGAAAATTAAGCAAATTACTCTTTGTGTTTTGGCGAGTGTTGTGCTTGTCGGTTGTGATTCAAGAATTGATGCAGTAAA
TCAGGAAATGGCCAATATTCGTAATCAGCCGCCACTCCCTATTGAACCAGCACCGATTTTTACTCCTGTACCACAATTTA
ATTACGCTGCTCATCAATTAAAAAGCCCATTTATGCCAAGTTCTCTTGCTGCCGAGCTCAAGATTATGGCGGGGAAACGG
GTTTATCCGAATTTCTCACGTGCGCCGCAACCACTCGAAAGTTATGCACTTGAAGCTTTAAATATGAAAGGGAGCATGCG
TAATAATCGAGGGCAGATATTGGCCCTGATCCAGTCACCGGATCAGCAGATTGAACGGGTACAAGTGGGTAACTATATGG
GTATGAATCAGGGCCGTATCACCCATATTAGTCCAACCCAGATTGATCTGGTTGAAATCGTACCGGATGGTCGAGAAGGC
TATGTCGAAAGACCGAGAACCTTGGTCTTGATTGGGCCTGCACCCTAA
ATGAAAATTAAGCAAATTACTCTTTGTGTTTTGGCGAGTGTTGTGCTTGTCGGTTGTGATTCAAGAATTGATGCAGTAAA
TCAGGAAATGGCCAATATTCGTAATCAGCCGCCACTCCCTATTGAACCAGCACCGATTTTTACTCCTGTACCACAATTTA
ATTACGCTGCTCATCAATTAAAAAGCCCATTTATGCCAAGTTCTCTTGCTGCCGAGCTCAAGATTATGGCGGGGAAACGG
GTTTATCCGAATTTCTCACGTGCGCCGCAACCACTCGAAAGTTATGCACTTGAAGCTTTAAATATGAAAGGGAGCATGCG
TAATAATCGAGGGCAGATATTGGCCCTGATCCAGTCACCGGATCAGCAGATTGAACGGGTACAAGTGGGTAACTATATGG
GTATGAATCAGGGCCGTATCACCCATATTAGTCCAACCCAGATTGATCTGGTTGAAATCGTACCGGATGGTCGAGAAGGC
TATGTCGAAAGACCGAGAACCTTGGTCTTGATTGGGCCTGCACCCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Acinetobacter baumannii D1279779 |
97.714 |
100 |
0.977 |
| comL | Acinetobacter baylyi ADP1 |
71.264 |
99.429 |
0.709 |