Detailed information NTG0122788

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: RR41_RS01555
• Genome accession: NZ_CP007712
• Coordinates: 328865..329923 (+)
• Length: 352 a.a.
• NCBI ID: WP_032003108.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii LAC-4
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 323865..334923

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RR41_RS01540 (ABLAC_03020)	-	324972..325304 (+)	333	WP_000169603.1	hypothetical protein	-
RR41_RS01545 (ABLAC_03030)	-	325307..326131 (+)	825	WP_002019666.1	putative RNA methyltransferase	-
RR41_RS01550 (ABLAC_03040)	ponA	326149..328704 (-)	2556	WP_000736686.1	penicillin-binding protein PBP1a	-
RR41_RS01555 (ABLAC_03050)	pilM	328865..329923 (+)	1059	WP_032003108.1	pilus assembly protein PilM	Machinery gene
RR41_RS01560 (ABLAC_03060)	pilN	329923..330564 (+)	642	WP_000201231.1	PilN domain-containing protein	Machinery gene
RR41_RS01565 (ABLAC_03070)	pilO	330561..331301 (+)	741	WP_000076097.1	type 4a pilus biogenesis protein PilO	Machinery gene
RR41_RS01570 (ABLAC_03080)	pilP	331312..331839 (+)	528	WP_000695065.1	pilus assembly protein PilP	Machinery gene
RR41_RS01575 (ABLAC_03090)	pilQ	331902..334067 (+)	2166	WP_001017033.1	type IV pilus secretin PilQ family protein	Machinery gene
RR41_RS01580 (ABLAC_03100)	aroK	334079..334648 (+)	570	WP_000643712.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 38972.53 Da
• Isoelectric Point: 4.4618

>NTDB_id=122788 RR41_RS01555 WP_032003108.1 328865..329923(+) (pilM) [Acinetobacter baumannii LAC-4]
MLKLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTHAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDSEVLPDRLANPNRVNVLLVATRTENVETRVEVLEL
VDLNPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRSLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=122788 RR41_RS01555 WP_032003108.1 328865..329923(+) (pilM) [Acinetobacter baumannii LAC-4]
GTGCTCAAGTTATATCGTAAACCTAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCAGTTGCAGAGGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTCATGCTGCAATT
GCTGTTCCGACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGCGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTCTGAGGTTTTGCCGGATCGTCTTG
CGAATCCAAATCGTGTAAATGTGCTCTTGGTCGCCACAAGAACAGAAAACGTTGAAACCCGCGTTGAAGTGCTTGAATTG
GTAGATTTAAATCCTAAATTGGCTGATGTTGAAAGTTACGCGGTTGAACGCGCTTTTAGCGTGTTTGCTGATAGCTTACC
GATGGGTGCAAATACCATAGGGATTTTAGATATCGGCCATACCATGACGACATTATCTGTCATGCAAAATGGCAAGATTA
TTTATACACGAGAGCAGGTCTTTGGCGGAAAACAACTTACGCTTGAAATTCAAAGTCGTTATGGTTTGTCTTTAGAAGAA
GCAAGCCGAGCGAAAAAAGATCGTTCTTTACCAGATGATTATGAAATTGAAGTGCTAGACCCATTTCTAGATGCGGTAGT
TCAGCAGGCGGCCCGTTCACTACAATTTTTCTTTTCTTCATCCCAATTTAACGAAATAGACCATATTTTGCTCGCTGGTG
GAAATGCGAATATTCCAGGCCTTGCCAAGCTTTTGCAGCAAAAATTAGGTTACCGTGTCACGATTGCCAACCCGTTTTTA
CAAATGGGCTTTTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCTTCATCTTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	99.148	100	0.991
comM	Acinetobacter nosocomialis M2	98.295	100	0.983
comM	Acinetobacter baylyi ADP1	80.682	100	0.807
pilM	Legionella pneumophila strain ERS1305867	41.808	100	0.42