Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ACOOFO_RS03755 Genome accession   NZ_OZ244162
Coordinates   817946..818311 (+) Length   121 a.a.
NCBI ID   WP_420429633.1    Uniprot ID   -
Organism   MAG: Algiphilus sp. isolate dd919ab0-ff71-4ff6-8152-ac5c3678e526     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 812946..823311
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACOOFO_RS03725 - 812975..813562 (-) 588 WP_420428319.1 YqgE/AlgH family protein -
  ACOOFO_RS03730 - 813598..814122 (-) 525 WP_420428320.1 Gx transporter family protein -
  ACOOFO_RS03735 - 814145..814504 (-) 360 WP_420428321.1 NusG domain II-containing protein -
  ACOOFO_RS03740 - 814501..815556 (-) 1056 WP_420428322.1 FAD:protein FMN transferase -
  ACOOFO_RS03745 gshB 815559..816518 (-) 960 WP_420428323.1 glutathione synthase -
  ACOOFO_RS03750 gshA 816515..817810 (-) 1296 WP_420428324.1 glutamate--cysteine ligase -
  ACOOFO_RS03755 pilG 817946..818311 (+) 366 WP_420429633.1 response regulator Regulator
  ACOOFO_RS03760 - 818308..818853 (+) 546 WP_420428325.1 chemotaxis protein CheW -

Sequence

Protein


Download         Length: 121 a.a.        Molecular weight: 13274.23 Da        Isoelectric Point: 5.1222

>NTDB_id=1171032 ACOOFO_RS03755 WP_420429633.1 817946..818311(+) (pilG) [MAG: Algiphilus sp. isolate dd919ab0-ff71-4ff6-8152-ac5c3678e526]
MVIDDSQTIRRTAETLLSRAGYEVITAQDGFEALAKIADHTPDLIFIDIMMPRLDGYQACALIKGNPSFSRTPVIMLSSK
DGLFDRARGRIVGSDQYLTKPFTKDELMAAVQAHLVQEGGA

Nucleotide


Download         Length: 366 bp        

>NTDB_id=1171032 ACOOFO_RS03755 WP_420429633.1 817946..818311(+) (pilG) [MAG: Algiphilus sp. isolate dd919ab0-ff71-4ff6-8152-ac5c3678e526]
ATGGTCATTGACGACAGTCAGACGATCCGGCGCACCGCCGAGACGCTGCTGTCGCGGGCCGGTTATGAAGTGATCACGGC
TCAGGATGGCTTTGAAGCGCTGGCAAAGATTGCCGACCACACGCCCGACCTGATCTTCATCGATATCATGATGCCGCGCC
TGGATGGCTATCAGGCCTGTGCGCTGATCAAGGGCAACCCCTCCTTCTCCAGGACGCCGGTCATCATGCTGTCGTCGAAG
GACGGTTTGTTTGACCGTGCGCGGGGGCGCATTGTGGGGTCCGACCAATACCTCACCAAGCCCTTCACCAAGGACGAGTT
GATGGCAGCCGTGCAGGCACACCTGGTACAGGAAGGTGGCGCGTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(1-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

72.174

95.041

0.686
  vicR Streptococcus mutans UA159

44.348

95.041

0.421
  pilH Synechocystis sp. PCC 6803

40.87

95.041

0.388
  chiS Vibrio cholerae strain A1552

40.87

95.041

0.388
  chpA Acinetobacter baumannii strain A118

39.655

95.868

0.38
  micA Streptococcus pneumoniae Cp1015

39.13

95.041

0.372

Multiple sequence alignment