Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | ACNALX_RS07110 | Genome accession | NZ_OZ223211 |
| Coordinates | 957800..958093 (+) | Length | 97 a.a. |
| NCBI ID | WP_047887563.1 | Uniprot ID | A0A0J1GZN8 |
| Organism | MAG: Photobacterium ganghwense isolate daa05ea6-4f3f-4f7c-82d4-3ed073323da5 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 952800..963093
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACNALX_RS07100 | hupB | 955237..955509 (+) | 273 | WP_047887561.1 | nucleoid-associated protein HU-beta | - |
| ACNALX_RS07105 | ppiD | 955762..957651 (+) | 1890 | WP_415720295.1 | peptidylprolyl isomerase | - |
| ACNALX_RS07110 | comEA | 957800..958093 (+) | 294 | WP_047887563.1 | ComEA family DNA-binding protein | Machinery gene |
| ACNALX_RS07115 | rrtA | 958258..958821 (-) | 564 | WP_415720296.1 | rhombosortase | - |
| ACNALX_RS07120 | - | 958832..959548 (+) | 717 | WP_415720297.1 | tRNA-uridine aminocarboxypropyltransferase | - |
| ACNALX_RS07125 | - | 959667..961049 (-) | 1383 | WP_273858961.1 | anti-phage deoxyguanosine triphosphatase | - |
| ACNALX_RS07130 | yfbR | 961049..961633 (-) | 585 | WP_047887566.1 | 5'-deoxynucleotidase | - |
| ACNALX_RS07135 | - | 961839..963053 (-) | 1215 | WP_047887567.1 | pyridoxal phosphate-dependent aminotransferase | - |
Sequence
Protein
Download Length: 97 a.a. Molecular weight: 10463.01 Da Isoelectric Point: 4.8177
>NTDB_id=1170639 ACNALX_RS07110 WP_047887563.1 957800..958093(+) (comEA) [MAG: Photobacterium ganghwense isolate daa05ea6-4f3f-4f7c-82d4-3ed073323da5]
MKTTLKALVLAVVVAGLPLGMAQANDNKHEGIEITVNINTANAEELDKLLLGVGPEKAVSIIEYRDTHGQFESIEQLSEV
KGIGPATVDKNRDRIQL
MKTTLKALVLAVVVAGLPLGMAQANDNKHEGIEITVNINTANAEELDKLLLGVGPEKAVSIIEYRDTHGQFESIEQLSEV
KGIGPATVDKNRDRIQL
Nucleotide
Download Length: 294 bp
>NTDB_id=1170639 ACNALX_RS07110 WP_047887563.1 957800..958093(+) (comEA) [MAG: Photobacterium ganghwense isolate daa05ea6-4f3f-4f7c-82d4-3ed073323da5]
ATGAAAACGACGTTGAAAGCACTGGTACTGGCCGTAGTTGTTGCCGGTCTGCCGCTGGGTATGGCACAAGCCAATGACAA
CAAGCATGAAGGCATTGAAATTACGGTCAACATCAATACGGCGAATGCTGAAGAGCTGGACAAACTCTTGCTGGGTGTAG
GGCCTGAGAAAGCCGTCAGTATCATCGAATACCGTGATACACATGGTCAGTTTGAATCGATTGAGCAACTCTCTGAAGTG
AAGGGGATTGGGCCGGCGACGGTGGACAAAAATCGTGACCGTATTCAGCTTTAA
ATGAAAACGACGTTGAAAGCACTGGTACTGGCCGTAGTTGTTGCCGGTCTGCCGCTGGGTATGGCACAAGCCAATGACAA
CAAGCATGAAGGCATTGAAATTACGGTCAACATCAATACGGCGAATGCTGAAGAGCTGGACAAACTCTTGCTGGGTGTAG
GGCCTGAGAAAGCCGTCAGTATCATCGAATACCGTGATACACATGGTCAGTTTGAATCGATTGAGCAACTCTCTGAAGTG
AAGGGGATTGGGCCGGCGACGGTGGACAAAAATCGTGACCGTATTCAGCTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae strain A1552 |
48.039 |
100 |
0.505 |
| comEA | Vibrio cholerae C6706 |
48.039 |
100 |
0.505 |
| comEA | Vibrio campbellii strain DS40M4 |
50 |
98.969 |
0.495 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
50 |
96.907 |
0.485 |
| comEA | Legionella pneumophila strain ERS1305867 |
36.634 |
100 |
0.381 |
| comEA | Legionella pneumophila str. Paris |
36.634 |
100 |
0.381 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
58.333 |
61.856 |
0.361 |