Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA3   Type   Regulator
Locus tag   ACLV7A_RS01730 Genome accession   NZ_OZ217344
Coordinates   334656..336635 (+) Length   659 a.a.
NCBI ID   WP_411863419.1    Uniprot ID   -
Organism   Streptococcus mitis isolate S. mitis E22     
Function   binding to XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 329656..341635
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLV7A_RS01715 (SMIE22_03290) - 330235..331095 (-) 861 WP_411863417.1 AraC family transcriptional regulator -
  ACLV7A_RS01720 (SMIE22_03300) gtfA 331145..332305 (+) 1161 Protein_289 sucrose phosphorylase -
  ACLV7A_RS01725 (SMIE22_03310) - 332773..333966 (+) 1194 WP_411863418.1 O-antigen ligase family protein -
  ACLV7A_RS01730 (SMIE22_03320) amiA3 334656..336635 (+) 1980 WP_411863419.1 peptide ABC transporter substrate-binding protein Regulator
  ACLV7A_RS01735 (SMIE22_03330) amiC 336702..338198 (+) 1497 WP_000759899.1 ABC transporter permease Regulator
  ACLV7A_RS01740 (SMIE22_03340) amiD 338198..339124 (+) 927 WP_000103703.1 oligopeptide ABC transporter permease OppC Regulator
  ACLV7A_RS01745 (SMIE22_03350) amiE 339133..340200 (+) 1068 WP_000159551.1 ABC transporter ATP-binding protein Regulator
  ACLV7A_RS01750 (SMIE22_03360) amiF 340211..341137 (+) 927 WP_042900321.1 ATP-binding cassette domain-containing protein Regulator

Sequence

Protein


Download         Length: 659 a.a.        Molecular weight: 72518.67 Da        Isoelectric Point: 4.8045

>NTDB_id=1170270 ACLV7A_RS01730 WP_411863419.1 334656..336635(+) (amiA3) [Streptococcus mitis isolate S. mitis E22]
MKKSRVFATAGLVLLAAGVLAACSSSKSSDSSAPKAYGYIYTADPETLDYLISSKNSTKVVTSNGIDGLFTNDNYGNLAP
AVAEYWEVSKDGLTYTYKIRKGVKWFTSDGEEYAEVTAKDFVNGLKHAADKKSEAMYLAENSVKGLADYLSGTSTDFSTV
GVKAVDDYTLQYTLNQPEPFWNSKLTYSIFWPLNEEFETSKGSDFAKPTDPTSLLYNGPFLLKGLTAKSSVEFVKNEQYW
DKENVHLDTINLAYYDGSDQESLERNFTSGAYSFARLFPTSSNYSKVAEEYKDNIYYTQPDSGIAGIGVNIDRQSYNYTS
KTTDSEKASTKKALLNKDFRQALNFAFDRSAYSAQINGKDGAALAVRNLFVKPDFVSVGEKTFGDLVAAQLPAYGDEWKG
VNLADGQDGLFNADKAKAEFAKAKKTLEADGVQFPIHLDVPVDQAAKGYISRIQSFKQSVETVLGAENVVVDIQQMTRDE
FLNITYYAANASAEDWDVSGGVSWGPDYQDPSTYLDILKTTSSETTKTYLGFDNPNSPAVVQVGLKEYDKLVDEAAKETS
DLNVRYEKYAAAQAWLTDSSLFIPAMASAGAAPVLSRVVPFTGASAQTGSKGSDVYFKYLKLQDKAVTKKEYEKAREKWL
KEKAESNEKAQKELASHVK

Nucleotide


Download         Length: 1980 bp        

>NTDB_id=1170270 ACLV7A_RS01730 WP_411863419.1 334656..336635(+) (amiA3) [Streptococcus mitis isolate S. mitis E22]
ATGAAAAAAAGTCGTGTATTTGCTACAGCAGGTCTTGTTTTATTAGCAGCAGGTGTACTTGCAGCATGCAGTTCTTCAAA
ATCATCTGATTCATCAGCCCCTAAAGCTTATGGCTATATTTATACAGCAGACCCAGAAACCTTGGACTACCTGATTTCAA
GTAAAAATAGTACAAAAGTAGTGACTTCAAATGGGATTGATGGTTTATTCACTAACGATAATTACGGGAATCTTGCTCCT
GCAGTTGCAGAGTATTGGGAAGTCTCTAAGGATGGTTTGACCTATACTTATAAGATTCGTAAAGGGGTTAAATGGTTTAC
CTCTGATGGAGAAGAATATGCAGAGGTGACGGCTAAAGATTTCGTGAACGGTTTAAAACACGCAGCAGATAAAAAATCAG
AAGCTATGTATTTAGCTGAAAATTCGGTTAAAGGCTTAGCAGATTATCTATCAGGAACTTCAACAGATTTTTCAACAGTT
GGTGTCAAGGCGGTTGATGATTATACGTTACAATACACTTTGAACCAGCCTGAACCGTTCTGGAACTCTAAGTTGACTTA
TTCTATTTTCTGGCCTCTGAATGAAGAATTCGAAACATCAAAAGGAAGCGATTTTGCTAAACCAACAGATCCGACATCCT
TGCTTTATAATGGTCCATTCTTGTTGAAAGGGTTGACTGCAAAATCTTCTGTAGAGTTTGTAAAAAATGAGCAATATTGG
GACAAAGAAAACGTCCACCTAGATACTATAAATCTGGCTTACTATGATGGCTCAGATCAGGAGTCGCTAGAGCGTAACTT
CACTAGTGGAGCTTATAGTTTTGCTCGTCTTTTCCCTACCAGTTCCAACTACTCTAAGGTTGCAGAAGAATACAAGGACA
ATATCTATTACACACAACCAGACTCTGGGATTGCTGGTATAGGTGTGAATATTGATCGCCAAAGTTACAACTATACTTCT
AAAACTACCGATTCAGAGAAAGCCTCTACTAAGAAGGCATTGCTTAACAAAGATTTCCGTCAAGCCTTGAATTTTGCTTT
TGATCGCTCAGCTTACTCTGCTCAAATCAATGGTAAAGATGGAGCAGCTTTAGCAGTTCGTAATCTATTTGTAAAACCAG
ACTTTGTTTCAGTTGGTGAGAAGACCTTTGGTGATTTAGTCGCTGCTCAACTTCCTGCCTATGGAGATGAGTGGAAAGGT
GTGAATTTAGCTGATGGGCAGGATGGTTTATTCAATGCTGACAAGGCCAAGGCAGAATTTGCAAAAGCTAAGAAAACTTT
AGAAGCAGACGGCGTTCAGTTCCCTATTCATTTGGATGTTCCAGTAGACCAAGCAGCAAAAGGCTACATATCCCGTATTC
AGTCCTTTAAACAATCTGTAGAAACAGTTCTTGGTGCTGAAAATGTCGTGGTTGATATTCAACAAATGACAAGAGATGAA
TTTCTTAATATCACTTACTATGCTGCTAATGCGTCAGCTGAGGATTGGGATGTATCGGGAGGAGTTTCATGGGGGCCAGA
CTATCAAGACCCATCTACTTACCTGGATATTTTAAAAACAACTAGCAGTGAAACTACAAAAACATATTTAGGATTTGATA
ATCCAAATAGCCCTGCAGTAGTTCAAGTTGGTTTGAAAGAATACGATAAATTAGTTGATGAAGCTGCCAAAGAGACAAGC
GACTTGAATGTCCGTTATGAAAAATATGCAGCGGCTCAAGCATGGTTGACAGATAGTTCACTCTTTATTCCTGCTATGGC
TTCTGCTGGTGCAGCACCGGTGCTTTCACGAGTTGTTCCATTTACTGGAGCTTCTGCGCAAACAGGCTCTAAGGGGTCAG
ATGTTTACTTCAAATATTTGAAATTACAAGATAAAGCGGTGACTAAGAAAGAGTATGAAAAAGCTCGTGAAAAATGGTTG
AAAGAAAAAGCTGAATCAAATGAGAAAGCTCAAAAAGAATTGGCAAGTCATGTGAAGTAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(78-522)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA3 Streptococcus thermophilus LMD-9

67.273

100

0.674
  amiA3 Streptococcus thermophilus LMG 18311

67.121

100

0.672
  amiA Streptococcus salivarius strain HSISS4

67.071

100

0.671

Multiple sequence alignment