Detailed information    

insolico Bioinformatically predicted

Overview


Name   amiE   Type   Regulator
Locus tag   ACLV7A_RS01745 Genome accession   NZ_OZ217344
Coordinates   339133..340200 (+) Length   355 a.a.
NCBI ID   WP_000159551.1    Uniprot ID   F9HLV7
Organism   Streptococcus mitis isolate S. mitis E22     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context


Location: 334133..345200
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLV7A_RS01730 (SMIE22_03320) amiA3 334656..336635 (+) 1980 WP_411863419.1 peptide ABC transporter substrate-binding protein Regulator
  ACLV7A_RS01735 (SMIE22_03330) amiC 336702..338198 (+) 1497 WP_000759899.1 ABC transporter permease Regulator
  ACLV7A_RS01740 (SMIE22_03340) amiD 338198..339124 (+) 927 WP_000103703.1 oligopeptide ABC transporter permease OppC Regulator
  ACLV7A_RS01745 (SMIE22_03350) amiE 339133..340200 (+) 1068 WP_000159551.1 ABC transporter ATP-binding protein Regulator
  ACLV7A_RS01750 (SMIE22_03360) amiF 340211..341137 (+) 927 WP_042900321.1 ATP-binding cassette domain-containing protein Regulator
  ACLV7A_RS01755 (SMIE22_03370) - 341552..342430 (-) 879 WP_411863420.1 LysR family transcriptional regulator -
  ACLV7A_RS01760 (SMIE22_03380) - 342558..342908 (-) 351 WP_000208712.1 helix-turn-helix domain-containing protein -
  ACLV7A_RS01765 (SMIE22_03390) - 343267..344892 (+) 1626 WP_411863421.1 malolactic enzyme -

Sequence


Protein


Download         Length: 355 a.a.        Molecular weight: 39549.11 Da        Isoelectric Point: 4.7541

>NTDB_id=1170273 ACLV7A_RS01745 WP_000159551.1 339133..340200(+) (amiE) [Streptococcus mitis isolate S. mitis E22]
MTKEKNVILTARDIVVEFDVRDKVLTAIRGVSLELVEGEVLALVGESGSGKSVLTKTFTGMLEENGRIAQGSIDYRGQDL
TALSSHKDWEQIRGAKIATIFQDPMTSLDPIKTIGSQITEVIVKHQGKTAKEAKELAIDYMNKVGIPDADRRFDEYPFQY
SGGMRQRIVIAIALACRPDVLICDEPTTALDVTIQAQIIDLLKSLQNEYHFTTIFITHDLGVVASIADKVAVMYAGEIVE
YGTVEEVFYDPRHPYTWSLLSSLPQLADDKGDLYSIPGTPPSLYTDLKGDAFALRSDYAMQIDFEQKAPQFSVSETHWAK
TWLLHEDAPKVEKPAVIANLHDKIREKMGFAHLED

Nucleotide


Download         Length: 1068 bp        

>NTDB_id=1170273 ACLV7A_RS01745 WP_000159551.1 339133..340200(+) (amiE) [Streptococcus mitis isolate S. mitis E22]
ATGACAAAAGAAAAAAATGTAATTTTGACTGCTCGCGATATTGTCGTGGAATTTGACGTTCGTGACAAAGTATTAACAGC
CATTCGTGGCGTTTCCCTTGAACTAGTTGAAGGAGAAGTATTAGCCTTGGTAGGTGAGTCAGGATCAGGGAAATCTGTTT
TGACAAAGACTTTCACAGGTATGCTTGAAGAAAATGGTCGCATTGCTCAGGGTAGTATTGACTACCGTGGTCAGGATTTG
ACAGCCTTATCTTCTCACAAGGATTGGGAACAAATTCGTGGTGCTAAGATTGCGACTATCTTCCAGGACCCAATGACTAG
TTTGGACCCAATTAAAACAATTGGTAGTCAGATTACAGAAGTTATTGTAAAACACCAAGGAAAAACAGCTAAAGAAGCGA
AAGAATTGGCCATTGACTACATGAATAAGGTTGGGATTCCAGACGCAGATAGACGTTTTGATGAATACCCATTCCAATAT
TCTGGAGGAATGCGTCAACGTATTGTTATTGCTATCGCCCTTGCCTGCCGACCTGATGTCTTGATCTGTGATGAGCCAAC
AACTGCCTTGGATGTGACTATCCAAGCACAGATTATTGATTTGCTAAAATCTTTACAAAACGAGTACCATTTCACAACAA
TCTTTATCACCCACGACCTTGGTGTGGTAGCAAGTATTGCGGATAAGGTAGCGGTTATGTATGCTGGAGAAATTGTTGAG
TATGGAACTGTTGAGGAAGTCTTCTATGACCCTCGCCATCCATATACATGGAGTCTCTTGTCTAGCTTGCCTCAGCTTGC
TGATGATAAAGGGGATCTTTACTCAATCCCAGGAACACCTCCGTCACTTTATACTGACCTGAAAGGGGATGCTTTTGCCT
TGCGTTCTGACTATGCAATGCAGATTGACTTCGAACAAAAAGCTCCTCAATTCTCAGTATCAGAGACACATTGGGCTAAA
ACTTGGCTTCTTCATGAGGATGCTCCAAAAGTAGAAAAACCAGCTGTGATTGCAAATCTCCACGATAAGATCCGTGAAAA
AATGGGATTTGCCCATCTGGAAGACTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB F9HLV7

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

87.887

100

0.879

  amiE Streptococcus thermophilus LMG 18311

86.197

100

0.862

  amiE Streptococcus thermophilus LMD-9

86.197

100

0.862

  oppD Streptococcus mutans UA159

54.261

99.155

0.538


Multiple sequence alignment