Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiC   Type   Regulator
Locus tag   ACLV7A_RS01735 Genome accession   NZ_OZ217344
Coordinates   336702..338198 (+) Length   498 a.a.
NCBI ID   WP_000759899.1    Uniprot ID   F9HLV5
Organism   Streptococcus mitis isolate S. mitis E22     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 331702..343198
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLV7A_RS01725 (SMIE22_03310) - 332773..333966 (+) 1194 WP_411863418.1 O-antigen ligase family protein -
  ACLV7A_RS01730 (SMIE22_03320) amiA3 334656..336635 (+) 1980 WP_411863419.1 peptide ABC transporter substrate-binding protein Regulator
  ACLV7A_RS01735 (SMIE22_03330) amiC 336702..338198 (+) 1497 WP_000759899.1 ABC transporter permease Regulator
  ACLV7A_RS01740 (SMIE22_03340) amiD 338198..339124 (+) 927 WP_000103703.1 oligopeptide ABC transporter permease OppC Regulator
  ACLV7A_RS01745 (SMIE22_03350) amiE 339133..340200 (+) 1068 WP_000159551.1 ABC transporter ATP-binding protein Regulator
  ACLV7A_RS01750 (SMIE22_03360) amiF 340211..341137 (+) 927 WP_042900321.1 ATP-binding cassette domain-containing protein Regulator
  ACLV7A_RS01755 (SMIE22_03370) - 341552..342430 (-) 879 WP_411863420.1 LysR family transcriptional regulator -
  ACLV7A_RS01760 (SMIE22_03380) - 342558..342908 (-) 351 WP_000208712.1 helix-turn-helix domain-containing protein -

Sequence

Protein


Download         Length: 498 a.a.        Molecular weight: 55576.08 Da        Isoelectric Point: 9.3559

>NTDB_id=1170271 ACLV7A_RS01735 WP_000759899.1 336702..338198(+) (amiC) [Streptococcus mitis isolate S. mitis E22]
MKKYIFMRVLRSLVSIFLVTTLTYTIIYTLVPRKLIFKQDPNYNKIATTADKRDNYENTVFERMGYIEYYDTKELQEKAS
SMDSSVTVEANATNKAIYEKYINQLGHGWTLGEFTESGQFYATREIPIFERVFHFYANLIDIDHTNKIQDPENPDLKRYL
RFENDPAIGWSLVGSGTKHKYLLYFNSQFPFVHQNFVNINLGDSYPTYANTPVLQVITQGQGQTKTAQVQFPTGKKTSSV
NIYSRTYKSPSQADSREVASYGKDDPYTATESNYQYPSMIVSSAIAGLIGLVISYAIAVPLGSAMARFKNTWIDSFSTGA
LTFLMALPTIALVYIVRLIGSSIGLPDSFPILGAGDWRSYVLPAVILGLLGAPGTAIWIRRYMIDLQSQDFVRFARAKGL
SEKEISNKHIFKNAMVPLVSGIPGAVIGVIGGATLTETVFAFPGMGKMLIDSVKASNNSMVVGLVFIFTCISIFSLLLGD
IWMTIIDPRIKLTEKGGK

Nucleotide


Download         Length: 1497 bp        

>NTDB_id=1170271 ACLV7A_RS01735 WP_000759899.1 336702..338198(+) (amiC) [Streptococcus mitis isolate S. mitis E22]
ATGAAAAAATATATTTTTATGCGTGTTTTGCGGTCATTGGTTTCGATTTTCTTAGTAACGACTTTGACCTACACGATTAT
CTATACTTTGGTTCCTCGAAAATTGATTTTCAAGCAGGATCCTAACTATAATAAAATTGCGACAACGGCTGATAAACGTG
ATAACTATGAAAATACTGTGTTTGAGCGTATGGGCTACATTGAGTATTACGATACTAAGGAGTTGCAAGAAAAGGCAAGT
AGCATGGATTCTTCTGTAACAGTAGAGGCAAATGCGACCAATAAAGCTATTTATGAAAAGTACATCAATCAATTAGGTCA
TGGTTGGACTTTGGGAGAATTTACTGAAAGTGGTCAATTTTATGCTACTCGTGAAATTCCAATTTTTGAACGTGTTTTTC
ACTTCTATGCTAACTTGATTGACATTGACCATACAAATAAAATTCAAGACCCTGAAAATCCAGACTTGAAACGTTACCTT
CGTTTCGAAAATGATCCAGCTATCGGATGGTCATTGGTCGGTTCAGGTACTAAACATAAATATCTCTTGTACTTCAACAG
TCAGTTCCCATTTGTGCATCAAAACTTTGTGAATATCAATTTAGGTGACTCTTATCCAACCTATGCTAATACACCAGTTC
TTCAGGTTATTACTCAAGGTCAAGGACAGACTAAAACTGCTCAAGTTCAGTTCCCAACAGGTAAGAAAACGTCTTCTGTA
AATATTTACTCAAGAACCTACAAGTCACCTAGTCAGGCTGACTCTCGTGAAGTAGCTAGCTATGGGAAAGATGATCCTTA
TACAGCGACTGAAAGTAATTACCAATATCCATCTATGATTGTCAGCTCTGCTATTGCTGGTTTGATTGGTTTGGTGATTT
CTTATGCGATTGCCGTGCCACTTGGTTCAGCTATGGCTCGTTTCAAGAACACTTGGATTGATAGCTTCTCAACAGGGGCT
TTGACCTTCTTGATGGCTCTTCCAACAATCGCCCTTGTTTATATTGTTCGATTGATTGGTTCTTCAATTGGCTTGCCAGA
TTCATTCCCTATCTTAGGTGCTGGAGATTGGCGCTCATATGTTTTACCAGCAGTTATTCTTGGTTTGTTGGGTGCTCCTG
GTACAGCCATTTGGATTCGTCGTTACATGATTGACTTGCAATCACAAGACTTTGTTCGTTTCGCTCGTGCAAAAGGTTTG
TCTGAAAAAGAAATTTCAAACAAACATATCTTTAAAAATGCCATGGTTCCGCTGGTTTCAGGAATTCCTGGTGCCGTTAT
TGGGGTGATCGGTGGTGCAACCCTTACTGAAACAGTCTTCGCCTTCCCAGGTATGGGTAAAATGTTGATTGACTCTGTAA
AAGCATCTAATAACTCTATGGTCGTAGGTCTTGTCTTCATCTTTACATGTATTTCTATCTTCTCACTTCTTTTGGGAGAT
ATTTGGATGACGATTATTGACCCACGTATTAAATTGACTGAGAAAGGAGGCAAATAA

Domains

Predicted by InterproScan.

Binding-protein-dependent transport system inner membrane component (BPD_transp_1)

(298-491)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB F9HLV5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiC Streptococcus salivarius strain HSISS4

77.108

100

0.771
  amiC Streptococcus thermophilus LMG 18311

76.908

100

0.769
  amiC Streptococcus thermophilus LMD-9

76.506

100

0.765

Multiple sequence alignment