Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | ACLV7A_RS01120 | Genome accession | NZ_OZ217344 |
| Coordinates | 212957..213910 (+) | Length | 317 a.a. |
| NCBI ID | WP_411863367.1 | Uniprot ID | - |
| Organism | Streptococcus mitis isolate S. mitis E22 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 207957..218910
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACLV7A_RS01075 (SMIE22_02080) | - | 208129..208494 (+) | 366 | WP_045606653.1 | DUF1033 family protein | - |
| ACLV7A_RS01080 (SMIE22_02090) | comGA/cglA/cilD | 208569..209510 (+) | 942 | WP_411863363.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| ACLV7A_RS01085 (SMIE22_02100) | comGB/cglB | 209458..210474 (+) | 1017 | WP_411864201.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| ACLV7A_RS01090 (SMIE22_02110) | comGC/cglC | 210476..210799 (+) | 324 | WP_000738649.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| ACLV7A_RS01095 (SMIE22_02120) | comGD/cglD | 210762..211196 (+) | 435 | WP_411863364.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| ACLV7A_RS01100 (SMIE22_02130) | comGE/cglE | 211159..211461 (+) | 303 | WP_000413380.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| ACLV7A_RS01105 (SMIE22_02140) | comGF/cglF | 211424..211885 (+) | 462 | WP_000250514.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| ACLV7A_RS01110 (SMIE22_02150) | comGG/cglG | 211863..212276 (+) | 414 | WP_411863365.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| ACLV7A_RS01115 (SMIE22_02160) | - | 212309..212896 (+) | 588 | WP_411863366.1 | class I SAM-dependent methyltransferase | - |
| ACLV7A_RS01120 (SMIE22_02170) | comYH | 212957..213910 (+) | 954 | WP_411863367.1 | class I SAM-dependent methyltransferase | Machinery gene |
| ACLV7A_RS01125 (SMIE22_02180) | - | 213961..215151 (+) | 1191 | WP_000167777.1 | acetate kinase | - |
| ACLV7A_RS01130 (SMIE22_02190) | rnpA | 215299..215670 (+) | 372 | WP_000739245.1 | ribonuclease P protein component | - |
| ACLV7A_RS01135 (SMIE22_02200) | - | 215645..216469 (+) | 825 | WP_218757961.1 | membrane protein insertase YidC | - |
| ACLV7A_RS01140 (SMIE22_02210) | jag | 216487..217473 (+) | 987 | WP_411863368.1 | RNA-binding cell elongation regulator Jag/EloR | - |
| ACLV7A_RS01145 (SMIE22_02220) | - | 217524..218147 (+) | 624 | WP_411863369.1 | HI_0552 family protein | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35658.97 Da Isoelectric Point: 4.3417
>NTDB_id=1170259 ACLV7A_RS01120 WP_411863367.1 212957..213910(+) (comYH) [Streptococcus mitis isolate S. mitis E22]
MDFEKIEQAYTYLLENVQVIQSDLTTNFYDALVEQNSIYLDGETELKQVKENNQALKRLALRKEEWLKTYQFLLMKAGQT
EPLQANHQFTPDAIALLLVFIVEELFKEEEITILEMGSGMGILGATFLTSLAKKVDYLGMEVDDLLIDLAASMADVIGLQ
AGFVQGDAVRPQMLKESDVVISDLPVGYYPDDVVASRHQVASSQEHTYAHHLLMEQGLKYLKSDGYAIFLAPSDLLTSPQ
SDLLKGWLKEEASLVAMISLPENLFASAKQSKTIFILQKKSEIVVEPFVYPLASLQDASVLMKFKENFQKWTQGTEI
MDFEKIEQAYTYLLENVQVIQSDLTTNFYDALVEQNSIYLDGETELKQVKENNQALKRLALRKEEWLKTYQFLLMKAGQT
EPLQANHQFTPDAIALLLVFIVEELFKEEEITILEMGSGMGILGATFLTSLAKKVDYLGMEVDDLLIDLAASMADVIGLQ
AGFVQGDAVRPQMLKESDVVISDLPVGYYPDDVVASRHQVASSQEHTYAHHLLMEQGLKYLKSDGYAIFLAPSDLLTSPQ
SDLLKGWLKEEASLVAMISLPENLFASAKQSKTIFILQKKSEIVVEPFVYPLASLQDASVLMKFKENFQKWTQGTEI
Nucleotide
Download Length: 954 bp
>NTDB_id=1170259 ACLV7A_RS01120 WP_411863367.1 212957..213910(+) (comYH) [Streptococcus mitis isolate S. mitis E22]
ATGGATTTTGAAAAAATTGAACAAGCTTATACCTATTTACTAGAGAATGTCCAAGTCATCCAAAGTGATTTGACGACCAA
CTTTTATGACGCCTTGGTGGAGCAAAATAGCATCTATCTGGATGGTGAGACAGAGCTAAAACAGGTCAAAGAGAACAATC
AAGCCCTTAAGCGCTTAGCGCTTCGCAAAGAAGAATGGCTCAAGACCTACCAGTTTCTCTTGATGAAGGCTGGGCAAACA
GAACCCTTGCAGGCTAATCACCAGTTTACGCCAGATGCTATTGCCTTGCTTTTGGTATTTATTGTGGAAGAGTTGTTTAA
AGAGGAGGAAATCACTATCCTCGAAATGGGTTCTGGCATGGGAATTCTGGGCGCTACTTTCTTGACCTCGCTTGCTAAAA
AAGTGGACTACTTGGGAATGGAAGTGGATGATTTGCTGATTGATTTGGCAGCTAGCATGGCAGACGTGATCGGATTGCAG
GCTGGCTTTGTCCAAGGAGATGCCGTTCGTCCACAAATGCTCAAAGAAAGCGATGTGGTCATCAGTGACTTGCCTGTTGG
CTATTATCCTGATGATGTCGTTGCGTCGCGCCATCAAGTTGCTTCTAGTCAAGAACATACCTACGCCCATCACTTGCTTA
TGGAACAAGGACTTAAGTATCTCAAGTCAGACGGATATGCTATTTTTCTAGCTCCGAGTGATTTGTTGACCAGTCCTCAA
AGTGATTTGTTGAAAGGATGGTTGAAAGAAGAGGCCAGTCTGGTTGCTATGATTAGTCTGCCTGAAAATCTCTTTGCTAG
TGCCAAACAATCCAAGACTATTTTTATCTTACAGAAGAAAAGTGAAATAGTAGTAGAACCCTTTGTTTATCCACTTGCTA
GCTTGCAAGATGCAAGTGTTTTAATGAAATTTAAAGAAAATTTTCAAAAATGGACTCAAGGTACTGAAATATAA
ATGGATTTTGAAAAAATTGAACAAGCTTATACCTATTTACTAGAGAATGTCCAAGTCATCCAAAGTGATTTGACGACCAA
CTTTTATGACGCCTTGGTGGAGCAAAATAGCATCTATCTGGATGGTGAGACAGAGCTAAAACAGGTCAAAGAGAACAATC
AAGCCCTTAAGCGCTTAGCGCTTCGCAAAGAAGAATGGCTCAAGACCTACCAGTTTCTCTTGATGAAGGCTGGGCAAACA
GAACCCTTGCAGGCTAATCACCAGTTTACGCCAGATGCTATTGCCTTGCTTTTGGTATTTATTGTGGAAGAGTTGTTTAA
AGAGGAGGAAATCACTATCCTCGAAATGGGTTCTGGCATGGGAATTCTGGGCGCTACTTTCTTGACCTCGCTTGCTAAAA
AAGTGGACTACTTGGGAATGGAAGTGGATGATTTGCTGATTGATTTGGCAGCTAGCATGGCAGACGTGATCGGATTGCAG
GCTGGCTTTGTCCAAGGAGATGCCGTTCGTCCACAAATGCTCAAAGAAAGCGATGTGGTCATCAGTGACTTGCCTGTTGG
CTATTATCCTGATGATGTCGTTGCGTCGCGCCATCAAGTTGCTTCTAGTCAAGAACATACCTACGCCCATCACTTGCTTA
TGGAACAAGGACTTAAGTATCTCAAGTCAGACGGATATGCTATTTTTCTAGCTCCGAGTGATTTGTTGACCAGTCCTCAA
AGTGATTTGTTGAAAGGATGGTTGAAAGAAGAGGCCAGTCTGGTTGCTATGATTAGTCTGCCTGAAAATCTCTTTGCTAG
TGCCAAACAATCCAAGACTATTTTTATCTTACAGAAGAAAAGTGAAATAGTAGTAGAACCCTTTGTTTATCCACTTGCTA
GCTTGCAAGATGCAAGTGTTTTAATGAAATTTAAAGAAAATTTTCAAAAATGGACTCAAGGTACTGAAATATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA140 |
55.272 |
98.738 |
0.546 |
| comYH | Streptococcus mutans UA159 |
54.952 |
98.738 |
0.543 |