Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   ACLV7Z_RS10690 Genome accession   NZ_OZ217343
Coordinates   2182767..2183948 (+) Length   393 a.a.
NCBI ID   WP_000681584.1    Uniprot ID   -
Organism   Streptococcus mitis isolate S. mitis G22     
Function   repress competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2177767..2188948
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLV7Z_RS10650 (SMIG22_21080) - 2178816..2179358 (+) 543 WP_057488235.1 TetR/AcrR family transcriptional regulator -
  ACLV7Z_RS10665 (SMIG22_21110) comE 2179601..2180353 (-) 753 WP_000866065.1 competence system response regulator transcription factor ComE Regulator
  ACLV7Z_RS10670 (SMIG22_21120) comD/comD1 2180350..2181675 (-) 1326 WP_218757900.1 GHKL domain-containing protein Regulator
  ACLV7Z_RS10675 (SMIG22_21130) comC/comC1 2181696..2181821 (-) 126 WP_218757899.1 competence-stimulating peptide ComC Regulator
  ACLV7Z_RS10685 (SMIG22_21150) rlmH 2182104..2182583 (-) 480 WP_218774424.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  ACLV7Z_RS10690 (SMIG22_21160) htrA 2182767..2183948 (+) 1182 WP_000681584.1 S1C family serine protease Regulator
  ACLV7Z_RS10695 (SMIG22_21170) spo0J 2184006..2184764 (+) 759 WP_218774425.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 393 a.a.        Molecular weight: 41642.46 Da        Isoelectric Point: 6.1498

>NTDB_id=1170245 ACLV7Z_RS10690 WP_000681584.1 2182767..2183948(+) (htrA) [Streptococcus mitis isolate S. mitis G22]
MKHLKTFYKKGFQLLVVIVISFFSGALGSFSIAQLTQKSSVSNSNNNSTITQTAYKNENSTTQAVNKVKDAVVSVITYSA
NRQNSVFGNDETDTDSQQISSEGSGVIYKKNDKEAYIVTNNHVINGASKVDIRLSDGTKVPGEIVGADTFSDIAVVKISS
EKVTTVAEFGDSSKLTVGETAIAIGSPLGSEYANTVTQGIVSSLNRNVSLKSEDGQAISTKAIQTDTAINPGNSGGPLIN
IQGQVIGITSSKIATNGGTSVEGLGFAIPANDAINIIEQLEKNGKVTRPALGIQMVNLSNISTSDIRRLNIPSNVTSGVV
VRSVQSNMPANGHLEKYDVITKVDDKEIASSTDLQSALYNHSIGDTIKITYYRNGKEETTSIKLDKSSGDLES

Nucleotide


Download         Length: 1182 bp        

>NTDB_id=1170245 ACLV7Z_RS10690 WP_000681584.1 2182767..2183948(+) (htrA) [Streptococcus mitis isolate S. mitis G22]
ATGAAACATTTAAAAACATTTTACAAAAAAGGGTTTCAATTATTAGTCGTTATCGTCATTAGCTTTTTTAGTGGAGCCTT
GGGTAGTTTTTCAATAGCTCAACTAACTCAAAAAAGTAGTGTAAGCAACTCTAACAACAATAGTACTATCACACAGACTG
CCTATAAGAACGAAAACTCAACAACTCAGGCTGTTAACAAAGTAAAAGATGCTGTTGTTTCTGTTATTACTTATTCAGCT
AACAGACAAAATAGCGTATTTGGCAATGATGAGACTGATACAGATTCTCAGCAAATCTCTAGTGAAGGATCTGGAGTTAT
TTATAAAAAGAATGATAAAGAAGCTTACATCGTCACCAACAATCACGTTATAAATGGCGCTAGCAAAGTAGATATTCGAT
TATCAGATGGGACTAAAGTACCTGGAGAAATTGTCGGAGCGGATACTTTCTCTGATATTGCTGTCGTCAAAATCTCTTCA
GAAAAAGTTACAACAGTAGCTGAGTTTGGTGATTCTAGCAAGTTAACCGTAGGAGAAACTGCTATTGCCATTGGTAGCCC
GTTAGGTTCTGAATATGCAAATACTGTCACTCAAGGTATCGTATCTAGTCTCAATCGAAATGTATCTTTAAAATCTGAAG
ATGGACAAGCCATTTCTACAAAAGCCATCCAAACTGATACTGCTATTAACCCAGGTAATTCTGGCGGTCCACTGATCAAT
ATTCAAGGACAGGTTATCGGAATTACCTCAAGTAAAATTGCCACAAATGGAGGAACATCTGTAGAAGGCCTTGGTTTCGC
AATCCCTGCAAATGATGCTATCAATATTATTGAACAGTTAGAAAAGAACGGAAAAGTTACACGCCCAGCTTTGGGAATCC
AGATGGTTAATTTATCTAATATAAGTACAAGTGACATCAGAAGACTCAATATTCCAAGTAATGTTACATCTGGCGTAGTT
GTTCGTTCTGTACAAAGTAATATGCCTGCCAATGGTCACCTTGAAAAATACGATGTTATTACAAAAGTAGATGACAAAGA
GATTGCTTCATCAACAGACTTACAAAGTGCTCTTTACAATCATTCTATCGGAGACACCATTAAGATCACTTACTATCGTA
ACGGTAAAGAAGAAACTACATCCATCAAGCTTGACAAGAGTTCAGGTGATTTAGAATCTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mitis NCTC 12261

98.473

100

0.985

  htrA Streptococcus pneumoniae Rx1

97.964

100

0.98

  htrA Streptococcus pneumoniae D39

97.964

100

0.98

  htrA Streptococcus pneumoniae R6

97.964

100

0.98

  htrA Streptococcus pneumoniae TIGR4

97.964

100

0.98

  htrA Streptococcus gordonii str. Challis substr. CH1

66.667

100

0.672

  htrA Streptococcus mutans UA159

54.822

100

0.55


Multiple sequence alignment