Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   ACLV7Z_RS10695 Genome accession   NZ_OZ217343
Coordinates   2184006..2184764 (+) Length   252 a.a.
NCBI ID   WP_218774425.1    Uniprot ID   -
Organism   Streptococcus mitis isolate S. mitis G22     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2179006..2189764
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLV7Z_RS10665 (SMIG22_21110) comE 2179601..2180353 (-) 753 WP_000866065.1 competence system response regulator transcription factor ComE Regulator
  ACLV7Z_RS10670 (SMIG22_21120) comD/comD1 2180350..2181675 (-) 1326 WP_218757900.1 GHKL domain-containing protein Regulator
  ACLV7Z_RS10675 (SMIG22_21130) comC/comC1 2181696..2181821 (-) 126 WP_218757899.1 competence-stimulating peptide ComC Regulator
  ACLV7Z_RS10685 (SMIG22_21150) rlmH 2182104..2182583 (-) 480 WP_218774424.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  ACLV7Z_RS10690 (SMIG22_21160) htrA 2182767..2183948 (+) 1182 WP_000681584.1 S1C family serine protease Regulator
  ACLV7Z_RS10695 (SMIG22_21170) spo0J 2184006..2184764 (+) 759 WP_218774425.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 252 a.a.        Molecular weight: 29113.57 Da        Isoelectric Point: 8.2539

>NTDB_id=1170246 ACLV7Z_RS10695 WP_218774425.1 2184006..2184764(+) (spo0J) [Streptococcus mitis isolate S. mitis G22]
MEKFEMISITDIQKNPYQPRKEFDREKLDELAQSIKENGVIQPIIVRQSPVIGYEILAGERRYRASLLAGLRSIPAVIKQ
LSDQEMMVQSIIENLQRENLNPIEEARAYESLVEKGFTHAEIADKMGKSRPYISNSIRLLSLPDAILSEVENGKLSQAHA
RSLVGLNKEQQDYFFQRIIEEDISVRKLEALLTEKKQKKLQKTDYFIKKEEEQLKKLLGLDVEIKMSKKDSGKIIISFSN
QEEYSRIINSLK

Nucleotide


Download         Length: 759 bp        

>NTDB_id=1170246 ACLV7Z_RS10695 WP_218774425.1 2184006..2184764(+) (spo0J) [Streptococcus mitis isolate S. mitis G22]
ATGGAAAAATTTGAAATGATTTCTATCACAGATATACAAAAAAATCCCTATCAACCTCGAAAAGAATTTGATAGAGAAAA
ACTAGATGAACTAGCACAGTCTATCAAAGAAAATGGGGTCATTCAACCGATTATTGTTCGTCAATCTCCTGTTATTGGTT
ATGAAATCCTTGCAGGAGAAAGACGCTATCGGGCTTCACTTTTAGCTGGCCTAAGGTCTATCCCAGCTGTTATTAAACAG
CTTTCAGACCAAGAGATGATGGTCCAGTCCATTATTGAAAATTTGCAGAGAGAAAATTTAAACCCAATAGAAGAAGCACG
CGCCTATGAATCTCTCGTAGAGAAAGGATTCACCCATGCTGAAATTGCAGATAAAATGGGAAAGTCTCGTCCTTATATCA
GCAACTCCATTCGTTTGCTTTCCTTGCCAGATGCTATCCTCTCAGAGGTAGAAAATGGCAAACTATCACAAGCGCATGCG
CGTTCTCTAGTTGGGTTGAATAAGGAACAACAAGACTATTTCTTTCAACGAATTATAGAAGAAGACATATCTGTAAGGAA
GTTAGAAGCTCTTCTGACAGAGAAAAAACAAAAGAAACTGCAAAAAACTGATTACTTCATAAAAAAAGAAGAAGAACAGT
TAAAAAAACTACTCGGATTAGATGTAGAAATCAAAATGTCTAAAAAAGATAGTGGAAAAATTATTATTTCTTTTTCAAAT
CAAGAAGAATACAGTAGAATTATCAACAGCCTGAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

50.593

100

0.508


Multiple sequence alignment