Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA/cilB/dalA   Type   Machinery gene
Locus tag   ACLV7H_RS05830 Genome accession   NZ_OZ217340
Coordinates   1120151..1120999 (-) Length   282 a.a.
NCBI ID   WP_411866630.1    Uniprot ID   -
Organism   Streptococcus oralis isolate S. oralis A22     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 1115151..1125999
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLV7H_RS05810 (SORA22_11690) - 1116053..1116709 (-) 657 WP_411866626.1 MmcQ/YjbR family DNA-binding protein -
  ACLV7H_RS05815 (SORA22_11700) - 1116753..1117385 (-) 633 WP_411866627.1 copper homeostasis protein CutC -
  ACLV7H_RS05820 (SORA22_11710) - 1117479..1117838 (-) 360 WP_411866628.1 YbaN family protein -
  ACLV7H_RS05825 (SORA22_11720) topA 1117946..1120033 (-) 2088 WP_411866629.1 type I DNA topoisomerase -
  ACLV7H_RS05830 (SORA22_11730) dprA/cilB/dalA 1120151..1120999 (-) 849 WP_411866630.1 DNA-processing protein DprA Machinery gene
  ACLV7H_RS05835 (SORA22_11740) - 1121080..1121709 (-) 630 WP_411866631.1 hypothetical protein -
  ACLV7H_RS05840 (SORA22_11750) lepA 1121853..1123676 (-) 1824 WP_045591143.1 translation elongation factor 4 -
  ACLV7H_RS05845 (SORA22_11760) - 1123755..1124483 (-) 729 WP_411866632.1 metallophosphoesterase family protein -

Sequence


Protein


Download         Length: 282 a.a.        Molecular weight: 31317.79 Da        Isoelectric Point: 5.0673

>NTDB_id=1169964 ACLV7H_RS05830 WP_411866630.1 1120151..1120999(-) (dprA/cilB/dalA) [Streptococcus oralis isolate S. oralis A22]
MKITNYEIYKLRKAGLTNQQILTVLEYDETVDQELLLGDIAEISGCRNPAVFMERYFQIDDAQLEKEFQKFPSFSILDDC
YPWDLSEIYDAPAILFYKGNLDLLKFPKVALVGSRSCSSQGAKSVQKVIQGLENELIVVSGLAKGIDTAAHMAALQNGGR
TIAVIGTGLDVFYPRANKRLQEHIGNHHLVLSEYGPEEEPLKFHFPARNRIIAGLCRGVIVAEARMRSGSLITCERAMEE
GRDVFAIPGNILDGHSDGCHHLIQEGAKLISSGQDVLAEFEF

Nucleotide


Download         Length: 849 bp        

>NTDB_id=1169964 ACLV7H_RS05830 WP_411866630.1 1120151..1120999(-) (dprA/cilB/dalA) [Streptococcus oralis isolate S. oralis A22]
ATGAAGATCACAAACTATGAGATTTACAAATTGAGAAAAGCTGGGCTGACAAATCAACAGATTTTAACTGTTCTTGAATA
CGATGAGACTGTAGATCAGGAGCTCTTGCTAGGTGACATTGCAGAAATATCGGGATGCCGTAATCCTGCTGTCTTTATGG
AACGCTATTTCCAGATAGATGATGCACAGTTGGAGAAGGAGTTCCAAAAATTCCCATCCTTCTCGATTCTAGACGACTGT
TATCCTTGGGATCTGAGTGAGATTTATGATGCTCCAGCGATCTTGTTTTATAAAGGGAATCTAGACTTATTGAAATTTCC
AAAGGTTGCTCTTGTAGGGAGTCGTTCATGTTCTAGTCAGGGAGCAAAGTCAGTTCAGAAAGTCATTCAAGGTTTGGAAA
ACGAGTTAATCGTGGTCAGTGGTTTGGCCAAAGGGATTGATACGGCTGCCCATATGGCTGCACTCCAGAATGGAGGAAGA
ACAATTGCTGTCATTGGAACAGGATTGGATGTTTTTTATCCCCGCGCCAATAAACGTTTGCAGGAACACATTGGCAATCA
CCATTTGGTACTTAGCGAATACGGACCAGAAGAGGAACCCTTGAAATTTCACTTTCCAGCTCGTAATCGAATCATAGCAG
GACTGTGCCGTGGCGTTATTGTAGCAGAGGCAAGGATGCGTTCAGGGAGTCTCATCACCTGTGAGCGTGCCATGGAGGAA
GGGCGTGATGTCTTTGCCATTCCAGGAAACATTTTAGATGGCCATTCAGATGGCTGTCACCACCTGATTCAAGAGGGAGC
AAAACTGATTTCCAGCGGTCAAGATGTGCTGGCTGAGTTTGAATTTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA/cilB/dalA Streptococcus mitis NCTC 12261

90.426

100

0.904

  dprA/cilB/dalA Streptococcus pneumoniae Rx1

90.071

100

0.901

  dprA/cilB/dalA Streptococcus pneumoniae D39

90.071

100

0.901

  dprA/cilB/dalA Streptococcus pneumoniae R6

90.071

100

0.901

  dprA/cilB/dalA Streptococcus pneumoniae TIGR4

90.071

100

0.901

  dprA/cilB/dalA Streptococcus mitis SK321

89.362

100

0.894

  dprA Streptococcus mutans UA159

60

99.291

0.596

  dprA Lactococcus lactis subsp. cremoris KW2

53.929

99.291

0.535


Multiple sequence alignment