Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiC   Type   Regulator
Locus tag   ACLV7H_RS01530 Genome accession   NZ_OZ217340
Coordinates   270522..272018 (+) Length   498 a.a.
NCBI ID   WP_411866176.1    Uniprot ID   -
Organism   Streptococcus oralis isolate S. oralis A22     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 265522..277018
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLV7H_RS01510 (SORA22_02930) endA 265678..266502 (+) 825 WP_045593588.1 DNA/RNA non-specific endonuclease Machinery gene
  ACLV7H_RS01515 (SORA22_02940) - 266638..267969 (+) 1332 WP_411866174.1 hemolysin family protein -
  ACLV7H_RS01525 (SORA22_02960) amiA3 268476..270455 (+) 1980 WP_411866175.1 peptide ABC transporter substrate-binding protein Regulator
  ACLV7H_RS01530 (SORA22_02970) amiC 270522..272018 (+) 1497 WP_411866176.1 ABC transporter permease Regulator
  ACLV7H_RS01535 (SORA22_02980) amiD 272018..272944 (+) 927 WP_411866177.1 oligopeptide ABC transporter permease OppC Regulator
  ACLV7H_RS01540 (SORA22_02990) amiE 272953..274020 (+) 1068 WP_411866178.1 ABC transporter ATP-binding protein Regulator
  ACLV7H_RS01545 (SORA22_03000) amiF 274031..274960 (+) 930 WP_411866179.1 ATP-binding cassette domain-containing protein Regulator
  ACLV7H_RS01550 (SORA22_03010) - 275049..276488 (-) 1440 WP_411866180.1 TrkH family potassium uptake protein -

Sequence

Protein


Download         Length: 498 a.a.        Molecular weight: 55747.12 Da        Isoelectric Point: 9.2425

>NTDB_id=1169940 ACLV7H_RS01530 WP_411866176.1 270522..272018(+) (amiC) [Streptococcus oralis isolate S. oralis A22]
MKKYIFMRVLRSLLSIFLVTTLTYTIIYTMVPRKLIFKQDTNYNKIATTPDKRDNYENTVYERMGYIEYYDTKELQERAS
TMDSSVTVDANDTNKAIYEKYINQLGNGWTLGVFSESGQFYATREIPIFERVFKFYANLIDIDHTNKIQDPENPNLQRYL
RFENDPAIGWSLVGSGTKHKYLLYFNNQFPFVHQNFVNINLGDSYPTYSNTPVLQVITQGQGQTKTSEVQFPTGKKTSSV
DIYSRTYKSPSQADAREVANYGKDDPYTATESNYQYPSMIASSAVAGLIGLIISYAIAIPLGSAMARHKNTWIDSFSTGA
LTFLLALPTIALVYIVRLIGSSIGLPDSFPILGAGDWRSYVLPAVILGLLGAPSTAIWIRRYMIDLQSQDFVRFARAKGL
SEKEISNKHIFKNAMVPLVSGIPGAVIGVIGGATLTETVFAFPGMGKMLIDSVKASNNSMVVGLVFIFTCISIFSLFVGD
IWMTMLDPRIKLTEKGGK

Nucleotide


Download         Length: 1497 bp        

>NTDB_id=1169940 ACLV7H_RS01530 WP_411866176.1 270522..272018(+) (amiC) [Streptococcus oralis isolate S. oralis A22]
ATGAAGAAATATATTTTTATGCGTGTATTGCGTTCATTGTTGTCAATTTTCTTGGTGACAACTTTGACTTACACAATTAT
TTATACGATGGTTCCTCGAAAATTGATTTTCAAGCAGGATACCAACTATAACAAGATTGCAACGACGCCGGACAAGCGGG
ATAATTATGAAAATACCGTTTATGAACGGATGGGCTATATCGAGTACTACGATACCAAAGAGTTGCAAGAAAGAGCGAGC
ACGATGGACTCATCTGTAACAGTAGATGCAAATGATACCAACAAAGCAATCTACGAAAAATACATTAACCAACTAGGAAA
TGGTTGGACGCTAGGTGTATTCTCAGAAAGTGGTCAATTCTATGCTACGCGTGAAATACCGATTTTTGAACGTGTTTTCA
AATTCTATGCCAACTTGATTGATATTGATCATACAAACAAGATTCAAGACCCTGAAAATCCAAACTTGCAGCGTTATCTT
CGTTTTGAAAATGACCCTGCTATCGGTTGGTCATTGGTTGGTTCAGGTACAAAACATAAATACCTTTTGTATTTCAACAA
TCAATTCCCATTTGTACACCAAAACTTTGTGAACATCAACTTGGGTGATTCTTATCCAACTTATTCAAACACACCAGTGC
TTCAGGTTATCACACAAGGTCAGGGACAAACGAAGACATCAGAAGTTCAATTCCCTACAGGTAAAAAGACTTCATCTGTA
GATATTTACTCTCGTACTTACAAATCTCCAAGTCAAGCAGACGCGCGTGAGGTAGCCAACTATGGTAAAGACGATCCATA
TACAGCTACAGAAAGCAATTACCAATACCCATCAATGATTGCAAGTTCAGCGGTTGCTGGTTTGATCGGTTTGATTATTT
CTTATGCGATTGCCATTCCACTTGGATCTGCTATGGCTCGCCACAAAAATACTTGGATTGACAGCTTCTCGACAGGTGCT
CTAACCTTCTTACTTGCCCTTCCAACGATTGCCTTGGTTTACATCGTGCGCTTGATTGGATCATCTATCGGTCTGCCAGA
CTCATTCCCTATCTTGGGGGCTGGAGATTGGCGTTCTTATGTTCTGCCAGCAGTTATTCTAGGTTTGTTGGGTGCGCCAA
GTACAGCTATTTGGATTCGTCGTTACATGATCGACTTGCAATCTCAAGACTTTGTACGTTTTGCTCGCGCCAAAGGTTTG
TCTGAAAAAGAAATTTCAAATAAACACATCTTTAAAAATGCCATGGTTCCTTTGGTTTCAGGTATTCCTGGTGCCGTAAT
CGGAGTTATAGGTGGTGCAACATTGACAGAAACAGTCTTCGCCTTCCCAGGTATGGGTAAAATGTTGATCGACTCTGTTA
AGGCATCCAACAACTCAATGGTAGTTGGTCTCGTCTTCATCTTCACATGTATTTCTATCTTCTCACTCTTTGTAGGAGAT
ATCTGGATGACCATGCTTGACCCACGTATTAAATTGACAGAGAAAGGAGGCAAATAA

Domains

Predicted by InterproScan.

Binding-protein-dependent transport system inner membrane component (BPD_transp_1)

(298-491)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiC Streptococcus salivarius strain HSISS4

76.707

100

0.767
  amiC Streptococcus thermophilus LMG 18311

76.104

100

0.761
  amiC Streptococcus thermophilus LMD-9

75.904

100

0.759

Multiple sequence alignment