Detailed information    

insolico Bioinformatically predicted

Overview

Name   comGG/cglG   Type   Machinery gene
Locus tag   ACLV7H_RS01085 Genome accession   NZ_OZ217340
Coordinates   187789..188202 (+) Length   137 a.a.
NCBI ID   WP_411866135.1    Uniprot ID   -
Organism   Streptococcus oralis isolate S. oralis A22     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 182789..193202
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLV7H_RS01050 (SORA22_02060) - 184067..184432 (+) 366 WP_000286396.1 DUF1033 family protein -
  ACLV7H_RS01055 (SORA22_02070) comGA/cglA/cilD 184495..185436 (+) 942 WP_042768810.1 competence type IV pilus ATPase ComGA Machinery gene
  ACLV7H_RS01060 (SORA22_02080) comGB/cglB 185384..186400 (+) 1017 WP_411867062.1 competence type IV pilus assembly protein ComGB Machinery gene
  ACLV7H_RS01065 (SORA22_02090) comGC/cglC 186402..186725 (+) 324 WP_220107351.1 competence type IV pilus major pilin ComGC Machinery gene
  ACLV7H_RS01070 (SORA22_02100) comGD/cglD 186688..187122 (+) 435 WP_411866134.1 competence type IV pilus minor pilin ComGD Machinery gene
  ACLV7H_RS01075 (SORA22_02110) comGE/cglE 187085..187387 (+) 303 WP_045591925.1 competence type IV pilus minor pilin ComGE Machinery gene
  ACLV7H_RS01080 (SORA22_02120) comGF/cglF 187350..187811 (+) 462 WP_045591923.1 competence type IV pilus minor pilin ComGF Machinery gene
  ACLV7H_RS01085 (SORA22_02130) comGG/cglG 187789..188202 (+) 414 WP_411866135.1 competence type IV pilus minor pilin ComGG Machinery gene
  ACLV7H_RS01090 (SORA22_02140) - 188235..188825 (+) 591 WP_411866136.1 class I SAM-dependent methyltransferase -
  ACLV7H_RS01095 (SORA22_02150) comYH 188884..189837 (+) 954 WP_411866137.1 class I SAM-dependent methyltransferase Machinery gene
  ACLV7H_RS01100 (SORA22_02160) - 189888..191078 (+) 1191 WP_411866138.1 acetate kinase -
  ACLV7H_RS01105 (SORA22_02170) rnpA 191228..191599 (+) 372 WP_084848875.1 ribonuclease P protein component -
  ACLV7H_RS01110 (SORA22_02180) - 191574..192401 (+) 828 WP_411866139.1 membrane protein insertase YidC -

Sequence

Protein


Download         Length: 137 a.a.        Molecular weight: 15643.11 Da        Isoelectric Point: 10.5748

>NTDB_id=1169932 ACLV7H_RS01085 WP_411866135.1 187789..188202(+) (comGG/cglG) [Streptococcus oralis isolate S. oralis A22]
MWKKQKVKAGVLLYAVTMAAIFSLLLQFYLNRQVAHHKDFALNKEKLAAFAMAKRSKDKVEQESGERVFNLGKVTYQNTK
TGFATSVRMNKDNYEFLFLPMKTQEKKTAKKEEVATDSSNQAGKKKSEEKPDKKANS

Nucleotide


Download         Length: 414 bp        

>NTDB_id=1169932 ACLV7H_RS01085 WP_411866135.1 187789..188202(+) (comGG/cglG) [Streptococcus oralis isolate S. oralis A22]
GTGTGGAAAAAGCAAAAAGTTAAGGCAGGCGTTCTTTTATATGCAGTCACCATGGCAGCCATTTTTAGCCTTTTGTTGCA
GTTTTATTTGAATCGGCAAGTAGCTCATCACAAAGACTTTGCCCTAAACAAAGAAAAGTTGGCAGCTTTTGCCATGGCCA
AGCGAAGTAAAGATAAGGTTGAACAAGAAAGTGGGGAACGAGTCTTTAACCTAGGAAAAGTCACTTATCAAAATACGAAA
ACAGGTTTTGCGACAAGTGTTCGTATGAATAAGGACAATTATGAATTTCTCTTTCTTCCGATGAAAACCCAAGAAAAGAA
AACAGCTAAAAAGGAAGAGGTAGCGACTGATTCAAGCAATCAAGCAGGGAAGAAAAAATCAGAAGAAAAGCCTGATAAGA
AAGCCAATTCCTAG

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGG/cglG Streptococcus mitis NCTC 12261

76.23

89.051

0.679
  comGG/cglG Streptococcus mitis SK321

75.41

89.051

0.672
  comGG/cglG Streptococcus pneumoniae Rx1

76.923

85.401

0.657
  comGG/cglG Streptococcus pneumoniae D39

76.923

85.401

0.657
  comGG/cglG Streptococcus pneumoniae R6

76.923

85.401

0.657
  comGG/cglG Streptococcus pneumoniae TIGR4

76.923

85.401

0.657

Multiple sequence alignment